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Record W4405613147 · doi:10.1007/s13225-024-00541-y

Fungal diversity notes 1818–1918: taxonomic and phylogenetic contributions on genera and species of fungi

2024· article· en· W4405613147 on OpenAlexaff
Ishara S. Manawasinghe, Kevin D. Hyde, Dhanushka N. Wanasinghe, Samantha C. Karunarathna, Sajeewa S. N. Maharachchikumbura, Milan C. Samarakoon, Hermann Voglmayr, Ka-Lai Pang, Michael Chiang, E. B. Gareth Jones, Ramesh K. Saxena, Arun Kumar, Kunhiraman C. Rajeshkumar, Laura Selbmann, Claudia Coleine, Yuwei Hu, A. Martyn Ainsworth, Kare Liimatainen, Tuula Niskanen, Anna B. Ralaiveloarisoa, Elangovan Arumugam, Kezhocuyi Kezo, Malarvizhi Kaliyaperumal, Sugantha Gunaseelan, Asha J. Dissanayake, Abdul Nasir Khalid, Achala J. Gajanayake, Adam Flakus, Alireza Armand, André Aptroot, Andre Rodrigues, Andrei Tsurykau, Ángela López-Villalba, Antônio Roberto Gomes de Farias, Antonio Sánchez, Aristóteles Goés‐Neto, Bruno Tomio Goto, Carlos Alberto Fragoso de Souza, Charuwan Chuaseeharonnachai, Chuan-Gen Lin, Cui-Jin-Yi Li, Cvetomir M. Denchev, Daniel Guerra-Mateo, Danushka S. Tennakoon, De-Ping Wei, Dominik Begerow, Eduardo Alves, Elisandro Ricardo Drechsler‐Santos, Enayra Silva Sousa, Érika Valente de Medeiros, Ewald Langer, Zhang Fa, Francisco Adriano de Souza, Franco Magurno, Gabriel Ginane Barreto, Gabriel Moreno, Gajanan Mane, Genivaldo Alves-Silva, Gladstone Alves da Silva, Guiyang Xia, H. F. Shen, Heng Gui, Indunil C. Senanayake, Janet Jennifer Luangsa-ard, Jia-Wei Liu, Jian‐Kui Liu, Jian Ma, Jieying Lin, José Evando Aguiar Beserra, J. Cano, Josepa Gené, Li Lu, Lidiane Alves dos Santos, Lijian Xu, Lorena Tigre Lacerda, Luís Fernando Pascholati Gusmão, Marcela E. S. Cáceres, Marcos Paz Saraiva Câmara, Maria Beatriz Barbosa de Barros-Barreto, Mark S. Calabon, Martin Kukwa, Martin Kemler, Maruzanete Pereira de Melo, Masoomeh Ghobad‐Nejhad, Mei Luo, Mengmeng Ding, Mingkwan Doilom, Monthien Phonemany, Muhammad Usman, Naritsada Thongklang, Nattawut Boonyuen, Nikhil Ashtekar, Nuwan D. Kularathnage, Papichaya Kwantong, Parayelil A. Ansil, Pepijn W. Kooij, Qi Zhao, Rafael Ferreira Alfenas, Rafael José Vilela de Oliveira, Raghvendra Singh, Rejane M. F. Silva, Rameshwar Avchar, Rashmi Morey, Rohit Sharma, Rong-Ju Xu, Rosa Mara Borges da Silveira, Rui-Fang Xu, Ruvishika S. Jayawardena, Salna Nanu, Salilaporn Nuankaew, Saowaluck Tibpromma, Saranyapath Boonmie, Sayanh Somrithipol, Sherin Varghese, Silvino Intra Moreira, Soumyadeep Rajwar, SHU-CHENG HE, T. K. Arun Kumar, Teodor T. Denchev, Thatsanee Luangharn, Thays Gabrielle Lins de Oliveira, Tian‐Ye Du, Ting‐Chi Wen, Tingting Du, Tong Wu, Veera Sri‐indrasutdhi, Vinson P. Doyle, Vladimir A. Baulin, Wei Dong, Wenli Li, Wenhua Lu, Wenhui Tian, Willie Anderson dos Santos Vieira, Wolfgang von Brackel, Xian-Dong Yu, Xian Zhang, Liu Xf, Xing-Can Peng, Yanpeng Chen, Yanyan Yang, Ying Gao, Yin-Ru Xiong, Yongxin Shu, Yong‐Zhong Lu, Yuan‐Min Shen, Yueyan Zhou, Yu Zhang, Wei Zhang, Zong-Long Luo, Manawaduge Ayesha Madushani, Ratchadawan Cheewangkoon, Jia Song, Biao Xu

Bibliographic record

VenueFungal Diversity · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsCarleton University
Fundersnot available
KeywordsBiologyBotany

Abstract

fetched live from OpenAlex

This article is the 17th in the Fungal Diversity Notes series which allows the researchers to publish fungal collections with updated reports of fungus-host and fungus-geography. Herein we report 97 taxa with four new genera distributed in three phyla (Ascomycota, Glomeromycota and Mucoromycota), 11 classes, 38 orders and 62 families collected from various regions worldwide. This collection is further classified into taxa from 69 genera with four novel genera namely Jinshana , Lithophyllospora , Parapolyplosphaeria and Stegonsporiicola . Furthermore, 71 new species, 21 new records, one new combination and four novel phylogenetic placements are provided. The new species comprise Acrocalymma estuarinum, Aggregatorygma isidiatum, Alleppeysporonites elsikii, Amphibambusa aquatica, Apiospora hongheensis, Arthrobotrys tachengensis, Calonectria potisiana, Collariella hongheensis, Colletotrichum squamosae, Corynespora chengduensis, Diaporthe beijingensis, Dicellaesporites plicatus, Dicellaesporites verrucatus, Dictyoarthrinium endophyticum, Distoseptispora chiangraiensis, Dothiora eucalypti, Epicoccum indicum, Exesisporites chandrae, Fitzroyomyces pseudopandanicola, Fomitiporia exigua, Fomitiporia rondonii, Fulvifomes subthailandicus, Gigaspora siqueirae, Gymnopus ailaoensis, Hyalorbilia yunnanensis, Hygrocybe minimiholatra, H. mitsinjoensis, H. parviholatra, H. solis, H. vintsy, Helicogermslita kunmingensis, Jinshana tangtangiae, Kirschsteiniothelia dujuanhuensis, Lamproderma subcristatum, Leucoagaricus madagascarensis, Leucocoprinus mantadiaensis, Lithophyllospora australis, Marasmius qujingensis, Melomastia aquilariae, Monoporisporites jansoniusii, M. pattersonii, Monoporisporites valdiyae, Mucispora maesotensis, Mucor soli, Muyocopron yunnanensis, Nigrospora tomentosae, Ocellularia psorirregularis, Ophiocordyceps duyunensis, Oxneriaria nigrodisca, Oxydothis aquatica, O. filiforme, Phacidiella xishuangbannaensis, Phlebiopsis subgriseofuscescens, Pleurothecium takense, Pleurotus tuber-regium, Pseudochaetosphaeronema puerensis, Pseudodactylaria guttulate, Racheliella chinensis, Rhexoacrodictys fangensis, Roussoella neoaquatica, Rubroboletus pruinosus, Sanghuangporus subzonatus, Scytalidium assmuthi, Shrungabeeja kudremukhensis, Spirographa skorinae, Stanjehughesia bambusicola, Stegonsporiicola aurantiaca, Umbelopsis hingganensis, Vararia tenuata, Verruconis pakchongensis, Wongia bandungensis, and Zygosporium cymodoceae . The new combination is Parapolyplosphaeria thailandica (≡ Polyplosphaeria thailandica ). The 21 new hosts, geographical and habitat records comprise Acrocalymma fici, Apiculospora spartii, Aspergillus subramanianii, Camposporium ramosum, Clonostachys rogersoniana, Colletotrichum brevisporum, C. plurivorum, Collybiopsis gibbosa, Dictyosporium tratense, Distoseptispora adscendens, Exosporium livistonae, Ganoderma gibbosum, Graphis mikuraensis, Gymnosporangium paraphysatum, Lasiodiplodia thailandica, Moesziomyces bullatus, Penicillium cremeogriseum, P. echinulonalgiovense, P. javanicum, P. lanosocoeruleum, P. polonicum, and Pleurotus tuber-regium. Graphis chlorotica, G. panhalensis and G. parilis are given as novel phylogenetic placements. In addition, we provide the morphology of Tarzetta tibetensis which was missing in the previous Fungal Diversity Notes 1611–1716. Identification of characterization of all these taxa are supported by morphological and multigene phylogenetic analyses.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.028
Threshold uncertainty score0.092

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0100.016
Science and technology studies0.0010.001
Scholarly communication0.0020.002
Open science0.0010.002
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0280.012

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.212
Teacher spread0.196 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations33
Published2024
Admission routes1
Has abstractyes

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