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Record W4405621264 · doi:10.48550/arxiv.2408.11861

Speaking the Same Language: Leveraging LLMs in Standardizing Clinical Data for AI

2024· preprint· en· W4405621264 on OpenAlex
Arindam Sett, Somaye Hashemifar, M. Ramu Yadav, Yogesh Pandit, Mohsen Hejrati

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

fundA Canadian funder is recorded on the work.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenuearXiv (Cornell University) · 2024
Typepreprint
Languageen
FieldSocial Sciences
TopicArtificial Intelligence in Law
Canadian institutionsnot available
FundersNational Health and Medical Research CouncilCanadian Institutes of Health ResearchGenentechNational Institutes of HealthIXICOH. Lundbeck A/SNational Cancer InstituteServierVetenskapsrådetEisaiLunds UniversitetUniversity of MelbourneRoyal Swedish Academy of SciencesCommonwealth Scientific and Industrial Research OrganisationNorthern California Institute for Research and EducationState Government of VictoriaBioClinicaBiogenPfizerNovartis Pharmaceuticals CorporationUniversity of Southern CaliforniaDementia Collaborative Research Centres, AustraliaEdith Cowan UniversityBristol-Myers SquibbEli Lilly and CompanyTorsten Söderbergs StiftelseAlzheimer's Disease Neuroimaging InitiativeMedical Research CouncilMeso Scale DiagnosticsScience and Industry Endowment FundAlzheimer's Association
KeywordsComputer scienceData science

Abstract

fetched live from OpenAlex

The implementation of Artificial Intelligence (AI) in the healthcare industry has garnered considerable attention, attributable to its prospective enhancement of clinical outcomes, expansion of access to superior healthcare, cost reduction, and elevation of patient satisfaction. Nevertheless, the primary hurdle that persists is related to the quality of accessible multi-modal healthcare data in conjunction with the evolution of AI methodologies. This study delves into the adoption of large language models to address specific challenges, specifically, the standardization of healthcare data. We advocate the use of these models to identify and map clinical data schemas to established data standard attributes, such as the Fast Healthcare Interoperability Resources. Our results illustrate that employing large language models significantly diminishes the necessity for manual data curation and elevates the efficacy of the data standardization process. Consequently, the proposed methodology has the propensity to expedite the integration of AI in healthcare, ameliorate the quality of patient care, whilst minimizing the time and financial resources necessary for the preparation of data for AI.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.005
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: Theoretical or conceptual
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.350
Threshold uncertainty score0.993

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0050.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0020.003
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.393
GPT teacher head0.387
Teacher spread0.006 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it