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Record W4405621264 · doi:10.48550/arxiv.2408.11861

Speaking the Same Language: Leveraging LLMs in Standardizing Clinical Data for AI

2024· preprint· en· W4405621264 on OpenAlexfundno aff
Arindam Sett, Somaye Hashemifar, M. Ramu Yadav, Yogesh Pandit, Mohsen Hejrati

Bibliographic record

VenuearXiv (Cornell University) · 2024
Typepreprint
Languageen
FieldSocial Sciences
TopicArtificial Intelligence in Law
Canadian institutionsnot available
FundersNational Health and Medical Research CouncilCanadian Institutes of Health ResearchGenentechNational Institutes of HealthIXICOH. Lundbeck A/SNational Cancer InstituteServierVetenskapsrådetEisaiLunds UniversitetUniversity of MelbourneRoyal Swedish Academy of SciencesCommonwealth Scientific and Industrial Research OrganisationNorthern California Institute for Research and EducationState Government of VictoriaBioClinicaBiogenPfizerNovartis Pharmaceuticals CorporationUniversity of Southern CaliforniaDementia Collaborative Research Centres, AustraliaEdith Cowan UniversityBristol-Myers SquibbEli Lilly and CompanyTorsten Söderbergs StiftelseAlzheimer's Disease Neuroimaging InitiativeMedical Research CouncilMeso Scale DiagnosticsScience and Industry Endowment FundAlzheimer's Association
KeywordsComputer scienceData science

Abstract

fetched live from OpenAlex

The implementation of Artificial Intelligence (AI) in the healthcare industry has garnered considerable attention, attributable to its prospective enhancement of clinical outcomes, expansion of access to superior healthcare, cost reduction, and elevation of patient satisfaction. Nevertheless, the primary hurdle that persists is related to the quality of accessible multi-modal healthcare data in conjunction with the evolution of AI methodologies. This study delves into the adoption of large language models to address specific challenges, specifically, the standardization of healthcare data. We advocate the use of these models to identify and map clinical data schemas to established data standard attributes, such as the Fast Healthcare Interoperability Resources. Our results illustrate that employing large language models significantly diminishes the necessity for manual data curation and elevates the efficacy of the data standardization process. Consequently, the proposed methodology has the propensity to expedite the integration of AI in healthcare, ameliorate the quality of patient care, whilst minimizing the time and financial resources necessary for the preparation of data for AI.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.037
metaresearch head score (Gemma)0.119
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.037
Threshold uncertainty score0.198

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0370.119
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0040.003
Science and technology studies0.0010.004
Scholarly communication0.0080.011
Open science0.0020.007
Research integrity0.0010.003
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.393
GPT teacher head0.387
Teacher spread0.006 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2024
Admission routes1
Has abstractyes

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Same venuearXiv (Cornell University)Same topicArtificial Intelligence in LawFrench-language works237,207