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Record W4405794594 · doi:10.1002/hbm.70104

<scp> segcsvd <sub>WMH</sub> </scp> : A Convolutional Neural Network‐Based Tool for Quantifying White Matter Hyperintensities in Heterogeneous Patient Cohorts

2024· article· en· W4405794594 on OpenAlexafffund
Erin Gibson, Joel Ramirez, Lauren Abby Woods, Julie Ottoy, Stephanie Berberian, Christopher J.M. Scott, Vanessa Yhap, Fuqiang Gao, Roberto Duarte Coello, María Valdés Hernández, Anthony E. Lang, Carmela M. Tartaglia, Sanjeev Kumar, Malcolm A. Binns, Robert Bartha, Sean Symons, Richard H. Swartz, Mario Masellis, Navneet Singh, Alan R. Moody, Bradley J. MacIntosh, Joanna M. Wardlaw, Sandra E. Black, Andrew Lim, Maged Goubran

Bibliographic record

VenueHuman Brain Mapping · 2024
Typearticle
Languageen
FieldMedicine
TopicCerebrovascular and Carotid Artery Diseases
Canadian institutionsHealth Sciences CentreWestern UniversityPublic Health OntarioBaycrest HospitalToronto Western HospitalUniversity of TorontoUniversity Health NetworkCentre for Addiction and Mental HealthSunnybrook Health Science Centre
FundersCanadian Institutes of Health Research
KeywordsHyperintensityMagnetic resonance imagingConvolutional neural networkDementiaWhite matterNeuroimagingSegmentationCognitive declineStroke (engine)Artificial intelligenceMedicineComputer scienceDiseaseNeuroscienceInternal medicinePsychologyRadiology

Abstract

fetched live from OpenAlex

ABSTRACT White matter hyperintensities (WMH) of presumed vascular origin are a magnetic resonance imaging (MRI)‐based biomarker of cerebral small vessel disease (CSVD). WMH are associated with cognitive decline and increased risk of stroke and dementia, and are commonly observed in aging, vascular cognitive impairment, and neurodegenerative diseases. The reliable and rapid measurement of WMH in large‐scale multisite clinical studies with heterogeneous patient populations remains challenging, where the diversity of imaging characteristics across studies adds additional complexity to this task. We present segcsvd WMH , a convolutional neural network‐based tool developed to provide reliable and accurate WMH quantification across diverse clinical datasets. segcsvd WMH was developed using a large dataset consisting of over 700 fluid‐attenuated inversion recovery MRI scans from seven multisite studies, spanning a wide range of clinical populations, WMH burdens, and imaging protocols. Model training incorporated anatomical information through a novel hierarchical segmentation approach, together with extensive data augmentation techniques to improve performance across varied imaging conditions. Benchmarked against three widely available segmentation tools, segcsvd WMH demonstrated superior accuracy, achieving mean Dice score improvements of 7.8% ± 9.7% over HyperMapp3r, 21.8% ± 8.6% over SAMSEG, and 43.5% ± 7.1% over WMH‐SynthSeg across four diverse test datasets. segcsvd WMH also maintained consistently high Dice scores across these test datasets (mean DSC = 0.86 ± 0.08), and exhibited strong, stable correlations with periventricular, deep, and total WMH ground truth volumes (mean r = 0.99 ± 0.01). Additionally, segcsvd WMH was robust to low and moderate levels of simulated MRI spike noise artifacts and maintained strong performance across a range of binary segmentation thresholds and WMH burden levels. These findings suggest that segcsvd WMH may provide more accurate and robust WMH segmentation performance for heterogeneous clinical datasets characterized by varying degrees of CSVD severity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.099
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.254
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations9
Published2024
Admission routes2
Has abstractyes

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