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Record W4406201229 · doi:10.1002/alz.091274

Global Research Integration Platform (GRIP): Open‐source Digital Voice Processing Toolkit

2024· article· en· W4406201229 on OpenAlexaff
Cody Karjadi, Huitong Ding, Edward Searls, Julia Peterson, Katherine A. Gifford, Abhishek Pratap, Ting Fang Alvin Ang, Rhoda Au

Bibliographic record

VenueAlzheimer s & Dementia · 2024
Typearticle
Languageen
FieldMedicine
TopicPhonocardiography and Auscultation Techniques
Canadian institutionsUniversity of Toronto
Fundersnot available
KeywordsComputer sciencePython (programming language)Mobile deviceMicrophoneSpeech recognitionHuman–computer interactionWorld Wide Web

Abstract

fetched live from OpenAlex

Abstract Background Producing speech is a cognitively complex task and can be collected through devices such as handheld recorders, tablets, and smartphones. Digital voice data can also capture information at a granular millisecond‐level precision and serve as a widespread tool to collect cognitively relevant data in almost any diverse real‐world environments. Digital voice recordings of spoken responses to neuropsychological test questions have been collected through the Framingham Heart Study (FHS) since 2005. The methods to analyze voice recordings were initially labor and time‐intensive approaches that were significant barriers to fully realizing the scientific objective of using speech and language as an alternative approach to cognitive assessment. Methods Through a collaboration with the Global Research Integration Platform (GRIP) and FHS, we leveraged existing open–source tools to create a digital voice processing toolkit that can be used by the general scientific community. GRIP is modularizing this toolkit to allow for seamless integration into various sites worldwide with low‐to‐high levels of technical experience. Table 1 lists the initial open‐source tools we tested on 9,253 audio recordings collected on 5,399 FHS participants. Each open‐source tool has a Python Github repository that we leveraged. Results With minimal manual intervention, we generated prosodic, spectral, cepstral, and sound quality features from the ComParE‐2016 feature set via openSMILE. We produced 65 LLDs (low‐level descriptors) every 10 milliseconds over a 60‐millisecond window and 6373 features generated by applying several statistical functionals to the LLDs. We segmented speakers via pyannote.audio and analyzed 9 acoustic and linguistic PRAAT features and 6373 openSMILE features in the context of a cognitive status classification task. Via Whisper, we generated timestamped transcriptions from both FHS and additional U.S. and international cohorts. We have noted difficulties in language detection and decreased transcription performance for non‐English speakers and English speakers with accents. We have used these data in numerous studies relating digital voice to AD related outcomes. Conclusion Digital voice is a prime candidate for scalable collection of cognitively relevant information. The modularized toolkit being developed will provide scaled non‐proprietary post‐processing of digital voice data that can be seamlessly integrated by users worldwide with low‐to‐high levels of technical experience.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.006
metaresearch head score (Gemma)0.019
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Software · Consensus signal: Software
Teacher disagreement score0.057
Threshold uncertainty score0.192

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0060.019
Meta-epidemiology (narrow)0.0030.001
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0040.002
Science and technology studies0.0000.001
Scholarly communication0.0030.003
Open science0.0040.006
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0570.042

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.079
GPT teacher head0.388
Teacher spread0.309 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreSoftware

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2024
Admission routes1
Has abstractyes

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