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Record W4406327710 · doi:10.1080/07060661.2024.2441916

Barley leaf cell-wall responses to the penetration by adapted and nonadapted powdery mildew fungi revealed with the thermal-source based Fourier transform infrared microspectroscopy and focal plane array

2025· article· en· W4406327710 on OpenAlexaffvenue
J. C. Tu, Chithra Karunakaran, Yangdou Wei, Gary Peng

Bibliographic record

VenueCanadian Journal of Plant Pathology · 2025
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant pathogens and resistance mechanisms
Canadian institutionsUniversity of SaskatchewanCanadian Light Source (Canada)Agriculture and Agri-Food Canada
Fundersnot available
KeywordsPowdery mildewPenetration (warfare)Fourier transform infrared spectroscopyCardinal pointFourier transformMaterials scienceOpticsBotanyBiologyPhysicsMathematics

Abstract

fetched live from OpenAlex

Infrared microspectroscopy allows for detailed characterization of functional groups at subcellular levels in plants. In this study, barley leaves were inoculated with Blumeria graminis f. sp. hordei (Bgh, adapted) and B. graminis f. sp. tritici (Bgt, nonadapted). Globar-based transmission Fourier transform infrared (gFTIR) microspectroscopy equipped with an upgraded high-resolution focal plane array (FPA) detector which enabled the rapid acquisition of high magnification imaging with a 3.3-μm × 3.3-μm capacity, was employed to quantitatively analyse the cell wall (CW) modification over individual leaf cells in response to attempted penetration at 24 hours post-inoculation. Univariate and multivariate analyses of gFTIR spectra revealed distinct changes in several CW functional groups upon attempted penetration by Bgt, with significant increases in the integrated areas of cellulose, hemicellulose, methyl-esterified pectins and lipid regions compared to cells without penetration. Notably, neither guaiacyl (G) nor syringyl (S) lignin increased significantly in CWs near Bgt penetration sites relative to nonpenetrating controls, though the G/S ratio was higher than in Bgh-penetrated sites. These findings suggest early and rapid CW modifications occur during the nonhost resistance to Bgt. This study also confirms previous results obtained using synchrotron-based FTIR (sFTIR), demonstrating that both gFTIR and sFTIR are valuable for studying plant CW apposition, with gFTIR being more accessible and rapid for imaging over large areas with compatible quality and resolution to sFTIR.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.169
Teacher spread0.164 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes2
Has abstractyes

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