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Record W4406361660 · doi:10.1007/s11427-024-2784-3

Epigenetics in the modern era of crop improvements

2025· review· en· W4406361660 on OpenAlexaff
Yan Xue, Xiaofeng Cao, Xiangsong Chen, Xian Deng, Xing Wang Deng, Yong Ding, Aiwu Dong, Cheng‐Guo Duan, Xiaofeng Fang, Lei Gong, Zhizhong Gong, Xiaofeng Gu, Chongsheng He, Hang He, Shengbo He, Xin‐Jian He, Yan He, Yuehui He, Guifang Jia, Danhua Jiang, Jianjun Jiang, Jinsheng Lai, Zhaobo Lang, Chen‐Long Li, Qing X. Li, Xingwang Li, Liu B, Bing Liu, Xiao Luo, Yijun Qi, Weiqiang Qian, Guodong Ren, Qingxin Song, Xianwei Song, Zhixi Tian, Jiawei Wang, Yuan Wang, Liang Wu, Zhe Wu, Rui Xia, Jun Xiao, Lin Xu, Zheng‐Yi Xu, Wenhao Yan, Hongchun Yang, Jixian Zhai, Yijing Zhang, Yusheng Zhao, Xuehua Zhong, Dao‐Xiu Zhou, Ming Zhou, Yue Zhou, Bo Zhu, Jiankang Zhu, Qikun Liu

Bibliographic record

VenueScience China Life Sciences · 2025
Typereview
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Molecular Biology Research
Canadian institutionsBiotechnology Research Institute
FundersNational Key Research and Development Program of ChinaScience and Technology Commission of Shanghai MunicipalityNational Natural Science Foundation of China
KeywordsEpigeneticsBiologyExploitTransformative learningEpigenesisAdaptation (eye)ReprogrammingComputational biologyBiotechnologyNeuroscienceGeneticsDNA methylationComputer sciencePsychologyGeneGene expression

Abstract

fetched live from OpenAlex

Epigenetic mechanisms are integral to plant growth, development, and adaptation to environmental stimuli. Over the past two decades, our comprehension of these complex regulatory processes has expanded remarkably, producing a substantial body of knowledge on both locus-specific mechanisms and genome-wide regulatory patterns. Studies initially grounded in the model plant Arabidopsis have been broadened to encompass a diverse array of crop species, revealing the multifaceted roles of epigenetics in physiological and agronomic traits. With recent technological advancements, epigenetic regulations at the single-cell level and at the large-scale population level are emerging as new focuses. This review offers an in-depth synthesis of the diverse epigenetic regulations, detailing the catalytic machinery and regulatory functions. It delves into the intricate interplay among various epigenetic elements and their collective influence on the modulation of crop traits. Furthermore, it examines recent breakthroughs in technologies for epigenetic modifications and their integration into strategies for crop improvement. The review underscores the transformative potential of epigenetic strategies in bolstering crop performance, advocating for the development of efficient tools to fully exploit the agricultural benefits of epigenetic insights.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.004
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.056
GPT teacher head0.351
Teacher spread0.295 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations37
Published2025
Admission routes1
Has abstractyes

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