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Record W4406532402 · doi:10.1002/jsfa.14117

Identification and quantitative trait locus mapping of Tartary buckwheat pre‐harvest sprouting

2025· article· en· W4406532402 on OpenAlexaff
Liwei Zhu, Yong Lv, Taoxiong Shi, Juan Huang, Qianqian Du, Genlou Sun, Odika Prince, Qingfu Chen

Bibliographic record

VenueJournal of the Science of Food and Agriculture · 2025
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicSeed and Plant Biochemistry
Canadian institutionsSaint Mary's University
FundersGuizhou Normal UniversityChina Agricultural Research SystemNational Natural Science Foundation of China
KeywordsQuantitative trait locusSproutingTraitBiologyLocus (genetics)Identification (biology)BotanyGeneticsGeneComputer science

Abstract

fetched live from OpenAlex

BACKGROUND: Tartary buckwheat (Fagopyrum tartaricum) is particularly vulnerable to pre-harvest sprouting (PHS) due to its extended flowering and fruiting cycle, especially during periods of prolonged rainfall. This susceptibility has significant adverse effects on yield, quality and post-harvest processing. In this study, a recombinant inbred lines (RILs) population (XJ-RILs) was developed from a cross between the PHS-susceptible Tartary buckwheat variety 'Xiaomiqiao' (female parent) and the highly PHS-resistant variety 'Jinqiaomai 2' (male parent). Key traits, including germination percentage, germination energy, germination index, field PHS (PHS-F) and simulated PHS (PHS-S), were evaluated, and a quantitative trait locus (QTL) mapping analysis was performed. RESULTS: (i) PHS-S was strongly and significantly correlated with PHS-F. (ii) A total of 11 QTLs associated with seed germination and 14 QTLs related to PHS were identified. Notably, the major QTL cluster qPHS8-1 was consistently detected and mapped within the interval of 8.53-9.65 Mbp on chromosome Ft8. (iii) Genotyping of 221 XJ-RILs across eight chromosomes revealed five residual heterozygous lines carrying a heterozygous interval of qPHS8-1 cluster, with inbred line R56 being particularly suited for the fine mapping of qPHS8-1. CONCLUSION: The PHS-S test, conducted on entire Tartary buckwheat spikes, is an effective and comprehensive method for assessing PHS resistance in this crop. QTL mapping identified qPHS8-1 as a major locus for PHS resistance, and inbred line R56 offers a promising resource for further fine mapping of this cluster. © 2025 Society of Chemical Industry.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.218
Teacher spread0.205 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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