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Record W4406812019 · doi:10.1038/s41592-025-02601-w

Author Correction: A comprehensive human embryo reference tool using single-cell RNA-sequencing data

2025· erratum· en· W4406812019 on OpenAlexaff
Cheng Zhao, Álvaro Plaza Reyes, John P. Schell, Jere Weltner, N. M. Ortega, Yi Zheng, Åsa K. Björklund, Laura Baqué-Vidal, Joonas Sokka, Ras Trokovic, Brian Cox, Janet Rossant, Jianping Fu, Sophie Petropoulos, Fredrik Lanner

Bibliographic record

VenueNature Methods · 2025
Typeerratum
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicSingle-cell and spatial transcriptomics
Canadian institutionsUniversité de MontréalCentre Hospitalier de l’Université de MontréalHospital for Sick ChildrenUniversity of Toronto
Fundersnot available
KeywordsComputational biologyRNAEmbryoBiologyComputer scienceCell biologyGeneticsGene

Abstract

fetched live from OpenAlex

In the version of this article initially published, the surname of Ras Trokovic was misspelled (as Torokovic). In Extended Data Fig. 10c, the “+” entry in the DE row under “Karvas et al.” appeared as a minus sign. The corrections have been made in the HTML and PDF versions of the article.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.042
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.152
Threshold uncertainty score0.509

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0040.042
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0040.003
Science and technology studies0.0040.002
Scholarly communication0.0030.002
Open science0.0030.003
Research integrity0.0030.008
Insufficient payload (model declined to judge)0.1520.077

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.121
GPT teacher head0.398
Teacher spread0.277 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2025
Admission routes1
Has abstractyes

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