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Record W4407137052 · doi:10.1128/mra.00731-24

Gut microbiome metagenomic sequences of honey bees ( <i>Apis mellifera</i> ) exposed to crops

2025· article· en· W4407137052 on OpenAlexafffundabout
Lance Lansing, Mitchell A. Cunningham, Josephine Ho, T. Deckers, Toby E. Newman, Limin Wu, Amanda Gregoris, Jackie Zorz, Louise Muntz, Kristen Lee, D. Trépanier-Leroux, Ida M. Conflitti, Mateus Pepinelli, Ella Walsh, Nuria Morfín, Janine E. Powell, Nancy A. Moran, Shelley E. Hoover, Stephen F. Pernal, R. William Currie, Pierre Giovenazzo, Ernesto Guzmán‐Novoa, Hosna Jabbari, Leonard J. Foster, Amro Zayed, Rodrigo Ortega Polo, M. Marta Guarna

Bibliographic record

VenueMicrobiology Resource Announcements · 2025
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicInsect and Pesticide Research
Canadian institutionsUniversité LavalUniversity of British ColumbiaAgriculture and Agri-Food CanadaUniversity of GuelphYork UniversityUniversity of ManitobaUniversity of LethbridgeUniversity of Victoria
FundersAgriculture and Agri-Food CanadaGovernment of CanadaGénome QuébecGenome CanadaOntario GenomicsOntario Genomics Institute
KeywordsMetagenomicsMicrobiomeGut microbiomeBiologyHoney beeHoney BeesEcologyBioinformaticsGeneticsGene

Abstract

fetched live from OpenAlex

ABSTRACT The gut microbiome of the European honey bee ( Apis mellifera ) is vital to its health, yet large-scale studies are scarce. We present metagenomic sequencing data from 180 samples collected near and far from eight crops across Canada over 2 years. These data sets will help address various biological and environmental questions.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.510
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.251
Teacher spread0.233 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2025
Admission routes3
Has abstractyes

Explore more

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