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Pathogens from Salmon Aquaculture in Relation to Conservation of Wild Pacific Salmon in Canada: An Alternative Perspective

2025· preprint· en· W4407166959 on OpenAlexaboutno aff
Gary D. Marty, Jayde A. Ferguson, Theodore R. Meyers, Thomas B. Waltzek, Esteban Soto, Michael L. Kent

Bibliographic record

VenuePreprints.org · 2025
Typepreprint
Languageen
FieldEnvironmental Science
TopicFish Ecology and Management Studies
Canadian institutionsnot available
Fundersnot available
KeywordsAquacultureFisheryPerspective (graphical)Fish <Actinopterygii>Relation (database)GeographyBiology

Abstract

fetched live from OpenAlex

Several articles over the past two decades have provided data, analyses, and interpretations that suggest significant impacts of farm salmon pathogens on wild Pacific salmon populations in British Columbia (BC), the westernmost province of Canada. Because disease is a normal part of all animal populations, there is always a potential for pathogen transfer between animal populations that interact. However, the evidence is weak for significant impacts of farm salmon pathogens on wild fish populations. We provide additional data and alternative interpretations of the available evidence to show that (i) many studies overestimate the risk of farm salmon pathogens and their diseases to wild salmon, (ii) these risks have not manifested as having significant impacts on wild salmon populations and, therefore, (iii) the evidence better supports the conclusion that farm salmon pathogens are having no more than minimal impact on wild salmon populations. Based on this information, we hypothesize that removing open net pen salmon farms will have no detectable effect on wild salmon population productivity in relation to reference salmon populations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.009
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.042
Threshold uncertainty score0.307

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.009
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0030.005
Science and technology studies0.0030.006
Scholarly communication0.0060.002
Open science0.0020.002
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.044
GPT teacher head0.285
Teacher spread0.241 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2025
Admission routes1
Has abstractyes

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Same venuePreprints.orgSame topicFish Ecology and Management StudiesFrench-language works237,207