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Record W4408240638 · doi:10.5376/mpb.2025.16.0001

Genetic Basis of Agronomic Traits in Cucumber: A Review of QTL Mapping Studies

2025· review· en· W4408240638 on OpenAlexvenueno aff
Fei Yang, Qianlu Gu, Wentao He, Decheng Hong, Min Yu, Jineng Yao

Bibliographic record

VenueMolecular Plant Breeding · 2025
Typereview
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicAdvances in Cucurbitaceae Research
Canadian institutionsnot available
Fundersnot available
KeywordsQuantitative trait locusBiologyFamily-based QTL mappingInclusive composite interval mappingGene mappingGeneticsBiotechnologyEvolutionary biologyGeneChromosome

Abstract

fetched live from OpenAlex

This study provides a comprehensive synthesis of the genetic basis underlying key agronomic traits in cucumber ( Cucumis sativus L.), focusing on findings from quantitative trait loci (QTL) mapping studies. By analyzing over 300 QTLs across 42 traits, the review highlights the significant progress in identifying genetic markers associated with essential agronomic characteristics, including yield, fruit quality, disease resistance, and growth habits. Noteworthy discoveries include major QTLs such as Ef1.1, which influences early flowering, and FS5.2, a key regulator of fruit size and shape. These findings underscore the intricate genetic architecture governing cucumber traits and the potential for marker-assisted selection (MAS) to enhance breeding efficiency. The review also addresses challenges in the reproducibility and validation of QTLs across different genetic backgrounds and environments. Furthermore, the integration of next-generation sequencing technologies has bolstered QTL mapping precision, providing detailed genetic maps and facilitating candidate gene identification. Future directions involve leveraging gene-editing technologies like CRISPR/Cas9 and combining multi-omics approaches to further elucidate the regulatory networks underlying agronomic traits. The insights from QTL mapping not only advance cucumber breeding efforts but also set the foundation for developing resilient, high-yielding, and high-quality cucumber varieties to meet agricultural demands.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Systematic review · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.003
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.003
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.064
GPT teacher head0.374
Teacher spread0.310 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSystematic review
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2025
Admission routes1
Has abstractyes

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