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Record W4408260323 · doi:10.1021/acs.jnatprod.4c01013

Connecting the Practice of Modern Qualitative and Quantitative NMR Analysis with Its Theoretical Foundation

2025· review· en· W4408260323 on OpenAlexaff
L. Botros, Yang Liu, Charlotte A. Corbett, Dan Sørensen, Christina M. Szabo, Anton Bzhelyansky, Matthias Niemitz, Petrus Korhonen, Guido F. Pauli, Patrick Giraudeau, G. Joseph Ray

Bibliographic record

VenueJournal of Natural Products · 2025
Typereview
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMetabolomics and Mass Spectrometry Studies
Canadian institutionsHealth CanadaStemcell Technologies
FundersNational Center for Complementary and Integrative HealthHorizon 2020 Framework ProgrammeAgence Nationale de la RechercheOffice of Dietary Supplements
KeywordsFoundation (evidence)Qualitative analysisQuantitative analysis (chemistry)ChemistryQualitative researchChromatographySociologyHistoryArchaeologyAnthropology

Abstract

fetched live from OpenAlex

High Resolution Image Download MS PowerPoint Slide This Perspective seeks to reconnect the current practice of nuclear magnetic resonance (NMR) spectroscopy in chemical structure and quantitative (qNMR) analysis with its roots in classical physics and quantum mechanics (QM). Rationales for this approach are derived from various angles, including focused reviews of the key parameters of the nuclear resonance phenomenon, the structural information richness of NMR spectra, and significant progress in both computational and spectrometer hardware. This provides collective reasoning for the reintegration of computational quantum mechanical spectral analysis (QMSA) into the contemporary practice of NMR spectral interpretation. Retethering operator-dependent visual phenotypic with QM-driven computational genotypic analysis yields more objective and accurate information by taking advantage of QM as the foundational reference point for NMR. Powerful computational tools for compound genotyping are available and evolve rapidly toward automation. In addition to enhancing the rigor and reproducibility of structure elucidation of new and the dereplication of known compounds, QM anchoring enables competent resolution of peak overlap, with resulting benefits in qNMR and low-field/benchtop NMR analysis. Furthermore, examination of common definitions and documentation practices shows that an evolutionary reconciliation of NMR terminology helps resolve ambiguities: shifting from phenotypic peak focus to genotypic QM-based pattern analysis is not only the logical next step when communicating structures of natural products and other molecules reproducibly but also a timely approach, as it yields QMSA-verified data for evolving knowledge bases for molecules of biomedical relevance.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.019
metaresearch head score (Gemma)0.020
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: Theoretical or conceptual
GenreCandidate signal: Review · Consensus signal: none
Teacher disagreement score0.019
Threshold uncertainty score0.098

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0190.020
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0030.002
Science and technology studies0.0020.025
Scholarly communication0.0090.010
Open science0.0040.006
Research integrity0.0040.008
Insufficient payload (model declined to judge)0.0130.006

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.029
GPT teacher head0.392
Teacher spread0.363 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations12
Published2025
Admission routes1
Has abstractyes

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