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Record W4408280049 · doi:10.26685/urncst.808

SciNapse 2024-2025 Undergraduate Science Case Competition: The Gut Microbiome

2025· article· en· W4408280049 on OpenAlexaff
Jade Gamelin Kao, Chris Kachi, Moumita Dutta

Bibliographic record

VenueUndergraduate Research in Natural and Clinical Science and Technology (URNCST) Journal · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGut microbiota and health
Canadian institutionsUniversity of Ottawa
Fundersnot available
KeywordsGut microbiomeMicrobiomeCompetition (biology)BiologyComputational biologyEcologyBioinformatics

Abstract

fetched live from OpenAlex

The SciNapse Undergraduate Science Case Competition (USCC) offers undergraduates the chance to craft an innovative research proposal. In this competition, a case study is provided, and students conduct comprehensive literature reviews—including scholarly publications, reports, and studies—to identify and connect crucial elements, which then form the basis of a supporting hypothesis. They also design a methodology to assess the validity of their hypothesis. This year’s case focused on the intricate and often overlooked realm of the gut microbiome, exploring its significant effects on human health, disease, and wider ecological systems. In teams of 1-4, undergraduate students engaged with the challenge by crafting innovative research proposals aimed to catalyze breakthroughs and deepen our understanding of the intricate gut microbiome. In total, the 2024-2025 USCC attracted 626 undergraduate students from 14 universities across North America. The top 10% of written submissions in each division are highlighted in this abstract booklet. You may find more information on the annual SciNapse USCC on our website at https://scinapsescience.com.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.009
metaresearch head score (Gemma)0.012
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.106
Threshold uncertainty score0.355

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0090.012
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.002
Science and technology studies0.0040.002
Scholarly communication0.0070.002
Open science0.0020.010
Research integrity0.0030.003
Insufficient payload (model declined to judge)0.1060.021

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.034
GPT teacher head0.421
Teacher spread0.387 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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