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Record W4408604983 · doi:10.1117/12.3041395

Scanless confocal light sheet microscopy for high-content and high-throughput imaging of cells and microorganisms

2025· article· en· W4408604983 on OpenAlexaff
S. Akbari, Nima Tabatabaei

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicAdvanced Fluorescence Microscopy Techniques
Canadian institutionsYork University
Fundersnot available
KeywordsLight sheet fluorescence microscopyMicroscopyThroughputConfocal microscopyOptical microscopeConfocalConfocal laser scanning microscopyMaterials scienceNanotechnologyOpticsComputer scienceBiophysicsScanning confocal electron microscopyScanning electron microscopeBiologyComposite material

Abstract

fetched live from OpenAlex

Fluorescent Confocal Microscopy (FCM) has revolutionized biology and medicine by enabling high-resolution, three-dimensional imaging of cells and tissues, advancing our understanding of disease mechanisms and facilitating the development of targeted therapies. However, effective utilization of FCM in many fields is limited by photobleaching/phototoxicity and its relatively slow imaging speed due to point-by-point scanning. Here we report on development of a scanless confocal microscopy technique with light sheet excitation. The core innovation behind this work is utilization of the broadband nature of fluorescence expression to eliminate the need for scanning light across the sample which, in return, significantly lowers the instrumentation complexity and the cost of the system. With such an approach, scanless performance is achieved by taking advantage of a narrow slit (optical encoding in one sample direction) and spectral encoding of the broadband fluorescent emission (spectral encoding in other sample direction). Results from Zemax numerical modeling, experimental characterization tests, and confocal imaging of HeLa and HEK293 cells will be presented.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.004
Threshold uncertainty score0.013

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0040.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.263
Teacher spread0.257 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2025
Admission routes1
Has abstractyes

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