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Record W4408735862 · doi:10.1016/j.bbadis.2025.167807

Pannexin-2 deficiency disrupts visual pathways and leads to ocular defects in zebrafish

2025· article· en· W4408735862 on OpenAlexafffund
Riya Shanbhag, Georg Zoidl, Fatema Nakhuda, Shiva Sabour, Heike Naumann, Christiane Zoidl, Armin Bahl, Nima Tabatabaei

Bibliographic record

VenueBiochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicConnexins and lens biology
Canadian institutionsYork University
FundersNatural Sciences and Engineering Research Council of CanadaDeutsche ForschungsgemeinschaftZukunftskolleg, Universität Konstanz
KeywordsZebrafishPannexinVisual systemNeuroscienceBiologyCell biologyRetinaGeneticsGap junction

Abstract

fetched live from OpenAlex

Pannexin-2 (Panx2) is a unique ion channel localized to ER-mitochondria contact sites. These specialized microdomains are abundant in neurons and glia and essential for cellular signaling and metabolism. While synaptic interactions are well-studied, the role of intracellular contacts, such as those of ER-mitochondrial junctions, in neuronal function and neurodegeneration remains largely unexplored. To investigate the roles of Panx2 in neuronal communication, we examined its expression pattern in the zebrafish brain and used TALEN technology to generate homozygous Panx2 knockout ( Panx2 Δ11 ) zebrafish. Our results demonstrate that panx2 mRNA is present in several brain regions, notably in visual centers such as the optic tectum and the thalamus. In 6 days post fertilization TL ( Panx2 +/+ ) larvae, Panx2 expression was observed in the retina and the arborization fields of the optic tract. Transcriptome profiling of Panx2 Δ11 larvae by RNA-seq analysis revealed down-regulation of genes involved in visual perception and lens development. Behavioral tests showed that loss of Panx2 leads to an altered ability to interpret visual information, such as changes in ambient illuminations, and respond with the characteristic motor action. Additionally, the knockout larvae displayed significantly impaired optomotor response. Lastly, when we tested the retinal structure of adult zebrafish eyes using optical coherence tomography, Panx2 Δ11 fish revealed a longer mean axial length and a negative shift in retinal refractive error (RRE) values. Our findings highlight a distinct, novel function of Panx2 in sensory perception and ocular health, beyond its recognized roles in neurodevelopment and cancer. • Pannexin-2 (Panx2), an ion channel, plays a novel role in neuronal communication. • Panx2 is expressed in visual centers of the zebrafish brain. • Panx2 knockout zebrafish larvae exhibit impaired visually-guided behaviors. • In adult fish, Panx2 deficiency leads to altered ocular geometry. • Our findings suggest a pivotal role for Panx2 in visual function and ocular health.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.014

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.258
Teacher spread0.252 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2025
Admission routes2
Has abstractyes

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