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Record W4408802802 · doi:10.1101/2025.03.20.644276

MEEGNet: An open source python library for the application of convolutional neural networks to MEG

2025· preprint· en· W4408802802 on OpenAlexaff
Arthur Dehgan, Annalisa Pascarella, Yann Harel, Irina Rish, Karim Jerbi

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2025
Typepreprint
Languageen
FieldComputer Science
TopicNeural Networks and Applications
Canadian institutionsMontreal Neurological Institute and HospitalInstitut Universitaire de Gériatrie de MontréalUniversité de Montréal
Fundersnot available
KeywordsPython (programming language)Convolutional neural networkComputer scienceOpen sourceArtificial intelligenceProgramming languageSoftware

Abstract

fetched live from OpenAlex

Abstract Artificial Neural Networks (ANNs) are rapidly gaining traction in neuroscience, proving invaluable for decoding and modeling brain signals from techniques such as electroencephalography (EEG) and functional magnetic resonance imaging (fMRI). Although these networks are beginning to find applications in magnetoencephalography (MEG), their use in this domain is still in the early stages. Here, we introduces MEEGNet, a novel Python library paired with an intuitive convolutional neural network (CNN) architecture designed primarily for MEG data, yet adaptable to EEG signals. The MEEGNet model was trained and cross-validated using MEG data from 643 participants across four classification tasks, including auditory and visual stimulus classification and age prediction. Our model achieves competitive performance across all tasks, with a notable balance of accuracy and efficiency—for instance, reaching 92.70% test accuracy in an auditory vs. visual classification task while maintaining shorter training times than other architectures. The MEEGNet pipeline also integrates latent space visualization tools, adapted for MEG and EEG data. These include saliency maps and Grad-CAM methods, which enhance the interpretability of ANN-based classification and help address the black-box critique of such models. Importantly, the MEEGNet library is designed for extensibility, allowing the neuroscience and machine learning communities to add functionalities and ANN models. By prioritizing usability, transparency, and interpretability, MEEGNet empowers MEG- and EEG-based research with a user-friendly and modular framework.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Software · Consensus signal: none
Teacher disagreement score0.049
Threshold uncertainty score0.165

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0030.002
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0490.018

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.251
Teacher spread0.232 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreSoftware

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2025
Admission routes1
Has abstractyes

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