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Record W4409148841 · doi:10.1038/s41586-025-08814-5

Global impoverishment of natural vegetation revealed by dark diversity

2025· article· en· W4409148841 on OpenAlexaff
Meelis Pärtel, Riin Tamme, Carlos P. Carmona, Kersti Riibak, Mari Moora, Jonathan Bennett, Alessandro Chiarucci, Milan Chytrý, Francesco de Bello, Ove Eriksson, Susan Harrison, Rob J. Lewis, Angela T. Moles, Maarja Öpik, Jodi N. Price, Vistorina Amputu, Diana Askarizadeh, Zohreh Atashgahi, Isabelle Aubin, Francisco M. Azcárate, Matthew D. Barrett, Maral Bashirzadeh, Zoltán Bátori, Natalie Beenaerts, Kolja Bergholz, Kristine Birkeli, Idoia Biurrun, José M. Blanco‐Moreno, Kathryn J. Bloodworth, Laura Boisvert‐Marsh, Bazartseren Boldgiv, Pedro H. S. Brancalion, Francis Q. Brearley, Charlotte Brown, C. Guillermo Bueno, Gabriella Buffa, James F. Cahill, Juan Antonio Campos, Giacomo Cangelmi, Michele Carbognani, Christopher Carcaillet, Bruno Enrico Leone Cerabolini, Richard Chevalier, Jan Clavel, José Miguel Costa, Sara A. O. Cousins, Jan Čuda, Mariana Dairel, Michele Dalle Fratte, Alena Danilova, John Davison, Balázs Déak, Silvia Del Vecchio, Iwona Dembicz, Jürgen Dengler, Jiří Doležal, Xavier Domene, Miroslav Dvorský, Hamid Ejtehadi, Lucas Enrico, Dmitrii Epikhin, Anu Eskelinen, Franz Essl, Gaohua Fan, Edy Fantinato, Fatih Fazlioglu, Eduardo Fernández‐Pascual, Arianna Ferrara, Alessandra Fidélis, Markus Fischer, Maren Flagmeier, T’ai G. W. Forte, Lauchlan H. Fraser, Junichi Fujinuma, Fernando Forster Furquim, Berle Garris, Heath W. Garris, Melisa A. Giorgis, Gianpietro Giusso del Galdo, Ana González‐Robles, Megan Good, Moisès Guardiola, Riccardo Guarino, Irene Guerrero, Joannès Guillemot, Behlül Güler, Yinjie Guo, Stef Haesen, Rúben Heleno, Toke T. Høye, Richard Hrivnák, Yingxin Huang, John T. Hunter, Dmytro Iakushenko, Ricardo Ibáñez, Nele Ingerpuu, Severin D. H. Irl, Eva Janíková, Florian Jansen, Florian Jeltsch, Anke Jentsch, Borja Jiménez‐Alfaro, Madli Jõks, Mohammad Hassan Jouri, Sahar Karami, Negin Katal, András Kelemen, Bulat I Khairullin, Anzar Ahmad Khuroo, Kimberly J. Komatsu, Marie Konečná, Ene Kook, Lotte Korell, Natalia Koroleva, Kirill Korznikov, Maria Kozhevnikova, Łukasz Kozub, Lauri Laanisto, Helena Lager, Vojtěch Lanta, Romina Lasagno, Jonas J. Lembrechts, Liping Li, Aleš Lisner, Kun Liu, Manuel Esteban Lucas‐Borja, Kristin Ludewig, Katalin Lukács, Jona Luther‐Mosebach, Petr Macek, Michela Marignani, Richard Michalet, Tamás Miglécz, Jesper Erenskjold Moeslund, Karlien Moeys, Daniel Montesinos, Eduardo Moreno‐Jiménez, Ivan Moysiyenko, Ladislav Mucina, Miriam Muñoz‐Rojas, Raytha de Assis Murillo, Sylvia M Nambahu, Lena Neuenkamp, Signe Normand, Arkadiusz Nowak, Paloma Nuche, Tatjana Oja, V. G. Onipchenko, Kalina Pachedjieva, Bruno Paganeli, Begoña Peco, Ana M. L. Peralta, Aaron Pérez‐Haase, Pablo L. Peri, Alessandro Petraglia, Gwendolyn Peyre, Pedro Antonio Plaza‐Álvarez, Jan Plue, Honor C. Prentice, Vadim Prokhorov, Dajana Radujković, Soroor Rahmanian, Triin Reitalu, Michael Ristow, Agnès Robin, Ana Belén Robles Cruz, Daniel A. Rodriguez Ginart, Ruben E. Roos, Leonardo Rosati, Jiřı́ Sádlo, Karina Salimbayeva, Rut Sánchez de Dios, Sanchir Khaliun, Cornelia Sattler, John Derek Scasta, Ute Schmiedel, Julian Schrader, Nick L. Schultz, Giacomo Sellan, Josep M. Serra‐Diaz, Giulia Silan, Hana Skálová, Nadiia Skobel, Judit Sonkoly, Kateřina Štajerová, Ivana Svitková, Sebastian Świerszcz, Andrew J. Tanentzap, Fallon M. Tanentzap, Rubén Tarifa, Pablo Tejero, Д. К. Текеев, Michael Tholin, Ruben S Thormodsæter, Yichen Tian, Alla Tokaryuk, Csaba Tölgyesi, Marcello Tomaselli, Enrico Tordoni, Péter Török, Béla Tóthmérész, Aurèle Toussaint, Blaise Touzard, Diego P. F. Trindade, James L. Tsakalos, Sevda Türkiş, Enrique Valencia, Mercedes Valerio, Orsolya Valkó, Koenraad Van Meerbeek, Vigdis Vandvik, Jesús Villellas, Risto Virtanen, Michaela Vítková, Martin Vojík, Andreas von Heßberg, Jonathan von Oppen, Viktoria Wagner, Ji‐Zhong Wan, Chun‐Jing Wang, Sajad A. Wani, Lina Weiß, Tricia Wevill, Sa Xiao, Oscar Zárate Martínez, Martin Zobel

Bibliographic record

VenueNature · 2025
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant and animal studies
Canadian institutionsTrent UniversityThompson Rivers UniversityUniversity of SaskatchewanUniversity of AlbertaNatural Resources CanadaCanadian Forest ServiceUniversité de Sherbrooke
FundersEesti Teadusagentuur
KeywordsBiodiversityEcologyEcosystemGeographyVegetation (pathology)Global biodiversitySpecies diversityBiodiversity hotspotPopulationAlpha diversityEcosystem diversityBiology

Abstract

fetched live from OpenAlex

. In the sampled regions with a minimal human footprint index, an average of 35% of suitable plant species were present locally, compared with less than 20% in highly affected regions. Besides having the potential to uncover overlooked threats to biodiversity, dark diversity also provides guidance for nature conservation. Species in the dark diversity remain regionally present, and their local populations might be restored through measures that improve connectivity between natural vegetation fragments and reduce threats to population persistence.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.214
Teacher spread0.206 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations33
Published2025
Admission routes1
Has abstractyes

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