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Record W4409285046 · doi:10.1093/bioadv/vbaf083

“Neuropathological function estimations”: a user-friendly module for analyzing neural activity in neurological disorders

2024· article· en· W4409285046 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.
aboutThe title or abstract carries a Canadian signal from the geographic lexicon.

Bibliographic record

VenueBioinformatics Advances · 2024
Typearticle
Languageen
FieldNeuroscience
TopicFunctional Brain Connectivity Studies
Canadian institutionsMontreal Neurological Institute and HospitalDouglas Mental Health University InstituteMcGill UniversityDawson College
FundersNatural Sciences and Engineering Research Council of CanadaCanadian Institutes of Health ResearchRéseau en Bio-Imagerie du Quebec
KeywordsNeuroscienceUser FriendlyFunction (biology)Computer scienceArtificial neural networkMedicinePhysical medicine and rehabilitationArtificial intelligencePsychologyBiologyOperating system

Abstract

fetched live from OpenAlex

Abstract Motivation This work introduces the Neuropathological Function Estimations software, designed to facilitate the study of neuronal activity alterations in neurological disorders without requiring programming expertise. With its user-friendly interface, researchers can input various data types to generate subject-specific functional brain models and decode neuropathological influences. Results The software’s capabilities are validated through its application to Alzheimer’s disease, providing insights into neuronal excitability and disease mechanisms. This tool has the potential to enhance our understanding of the biological basis of in vivo neural activity and contribute to the development of personalized therapeutic interventions. Availability and implementation The latest version of the software and support are freely available for noncommercial users through the Neuroinformatics for Personalized Medicine Lab (NeuroPM Lab) website at McGill University (https://www.neuropm-lab.com/neuropm-box.html). The software is maintained by the NeuroPM team. This publication is linked to version 1.0.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.006
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.807
Threshold uncertainty score0.724

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.006
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.002
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.293
Teacher spread0.264 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it