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Record W4409633492 · doi:10.1158/1538-7445.am2025-4748

Abstract 4748: Understanding the RSAD2/CMPK2 signaling axis in PVT1 exon 9 overexpressed neuroendocrine prostate cancer

2025· article· en· W4409633492 on OpenAlexaboutno aff
R Bonacci, Meghan McGill, N. Le, Murtaza Barkarar, Chinedum Udekwu, Olorunseun O. Ogunwobi

Bibliographic record

VenueCancer Research · 2025
Typearticle
Languageen
FieldMedicine
TopicProstate Cancer Treatment and Research
Canadian institutionsnot available
Fundersnot available
KeywordsPVT1Prostate cancerExonCancerMedicineProstateCancer researchBiologyInternal medicineGeneticsGeneLong non-coding RNARNA

Abstract

fetched live from OpenAlex

Introduction/Background: Plasmacytoma variant translocation 1 (PVT1) is overexpressed in prostate cancer (PCa) and alters gene expression directly or by acting as a noncoding RNA sponge. Our group previously identified overexpression of PVT1 exon 9 in aggressive PCa tissues and cell lines and overexpression led to transformation of non-tumorigenic prostate epithelial cells to PCa with neuroendocrine prostate cancer (NEPC) phenotype when implanted in vivo. RNA-sequencing analysis of our PVT1 exon 9 overexpression PCa model revealed upregulation of Radical S-Adenosyl Methionine Domain Containing (RSAD2) downstream of PVT1 exon 9. We have uncovered RSAD2 overexpression as a common characteristic of NEPC and have elucidated two novel molecular pathways at play in this disease; PVT1 exon 9 independent and dependent RSAD2 upregulation. These pathways lead to differences in Type II interferon signaling, immune signaling and AR sensitization. RSAD2 is located upstream of and directly interacts with CMPK2 in a variety of cellular models and some of their functions are interdependent. Objectives/Hypothesis: We hypothesize that RSAD2 and CMPK2 work together to contribute to NEPC pathogenesis regardless of PVT1 exon 9 overexpression status. Methods: We tested this hypothesis with a variety of genetic and biochemical approaches. Results: RNA-sequencing analysis of our PVT1 exon 9 overexpression NEPC model (RWPE1, RWPE1_ev, RWPE1_ex9) revealed significant (p-value < 0.05) upregulation of RSAD2 and CMPK2, in RWPE1_ex9 as compared to RWPE1_ev and RWPE1. In a second NEPC model (that also models circulating tumor cells in metastasis) derived from 22RV1 castrate-resistant prostate cancer (CRPC) parental cells implanted in vivo and isolated from blood, we found overexpression of PVT1 exon 9, RSAD2 and CMPK2 in isolated circulating tumor cells (C22OH) we have previously validated as having neuroendocrine features. In NEPC models that do not overexpress PVT1 exon 9, such as DU145 and NCI-H660, we found only overexpression of RSAD2 but not CMPK2. Knockdown of CMPK2 led to ∼35% decreased cell viability in all models suggesting that CMPK2 may be a cancer promoting aberration in NEPC. Both RSAD2 and CMPK2 are clinically relevant and significantly overexpressed in neuroendocrine prostate cancer human cohorts. Overexpression models of CMPK2 revealed alterations in cell proliferation, colony formation and PD-L1 immune signaling and localization suggestive of a larger role in prostate cancer pathogenesis. Discussion/Conclusions: Based on these results, PVT1 exon 9, RSAD2 and CMPK2 are promising therapeutic targets in PVT1 exon 9 overexpressed NEPC whereas RSAD2 targeting alone may be more useful in NEPC without PVT1 exon 9 overexpression. Further investigation is ongoing to understand therapeutic strategies to use alone or in combination with current clinically approved therapeutics. Citation Format: Rachel E. Bonacci, Meghan McGill, Nu Thuy Anh Le, Murtaza Barkarar, Chinedum Udekwu, Olorunseun O. Ogunwobi. Understanding the RSAD2/CMPK2 signaling axis in PVT1 exon 9 overexpressed neuroendocrine prostate cancer [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2025; Part 1 (Regular Abstracts); 2025 Apr 25-30; Chicago, IL. Philadelphia (PA): AACR; Cancer Res 2025;85(8_Suppl_1):Abstract nr 4748.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.144
GPT teacher head0.444
Teacher spread0.300 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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