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Can inverse calibration help improving process-explicit species distribution models?

2025· article· en· W4409996087 on OpenAlexaff
Victor Van der Meersch, Isabelle Chuine

Bibliographic record

VenueEcological Modelling · 2025
Typearticle
Languageen
FieldEnvironmental Science
TopicSpecies Distribution and Climate Change
Canadian institutionsOkanagan University CollegeUniversity of British Columbia, Okanagan CampusUniversity of British Columbia
FundersUniversité de Montpellier
KeywordsCalibrationProcess (computing)InverseDistribution (mathematics)Biological systemMathematicsApplied mathematicsComputer scienceEnvironmental scienceMathematical optimizationEcologyStatisticsBiologyMathematical analysis

Abstract

fetched live from OpenAlex

Process-explicit models (PEMs) are expected to provide reliable projections of species range shifts because they explicitly model the biological mechanisms that drive species responses to climate. However, their application is often limited by the need for diverse and detailed datasets, which are only available for a limited number of species. Inverse calibration has been identified as an avenue to help calibrate PEMs for many species, but it is still unclear whether it can provide biologically meaningful parameter estimates. Here, we investigated the potential of inverse calibration techniques to improve the accuracy of PEMs. We examined the discrepancies in parameter estimates obtained by classical and inverse calibration approaches. We evaluated two inverse calibration strategies: (i) calibrating all parameters simultaneously and (ii) focusing only on critical parameters. We assessed the realism of the obtained parameter estimates and the simulated processes by comparing them with measurements and observations across Europe. We show that when the entire model is calibrated at once, the model structure alone may not sufficiently constrain parameter estimation, leading to unrealistic parameter values. However, selective application of the inverse calibration approach – focusing on critical parameters – can improve model performance while still simulating realistic biological mechanisms.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.025
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.008
Threshold uncertainty score0.022

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.025
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0020.005
Open science0.0020.002
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0070.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.042
GPT teacher head0.239
Teacher spread0.198 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2025
Admission routes1
Has abstractno

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