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Record W4410101106 · doi:10.1093/mcfafs/vtaf008

Linking hierarchical population models with habitat data improves assessment of data-limited salmon stocks

2025· article· en· W4410101106 on OpenAlexafffundabout
William I. Atlas, Dylan M. Glaser, Brendan Connors, Carrie A. Holt, Dan A. Greenberg, Daniel T. Selbie, Steve Cox‐Rogers, Charmaine Carr‐Harris, Eric Hertz, Jonathan W. Moore

Bibliographic record

VenueMarine and Coastal Fisheries · 2025
Typearticle
Languageen
FieldEnvironmental Science
TopicFish Ecology and Management Studies
Canadian institutionsPacific Salmon FoundationFisheries and Oceans CanadaTula FoundationSimon Fraser University
FundersLiber Ero Foundation
KeywordsHabitatPopulationFisheryEcologyStock assessmentOncorhynchusGeographySpawn (biology)BiologyFishingFish <Actinopterygii>

Abstract

fetched live from OpenAlex

ABSTRACT Objective Managing data-limited populations is a challenge to the sustainability of fisheries globally. Meta-analytic approaches, where insights from data-rich populations are drawn on to inform data-limited ones, along with the use of habitat-based information, have each been proposed as ways to overcome data-limited assessment challenges, but the two approaches have rarely been combined. Sockeye Salmon Oncorhynchus nerka spawn and rear in many remote coastal watersheds of British Columbia, Canada, challenging comprehensive population assessments. Estimating conservation and management reference points for such populations is particularly relevant given their importance to Indigenous and commercial fisheries. Most Sockeye Salmon have obligate lake-rearing as juveniles, and total abundance is typically limited by production in nursery lakes. Although methods have been developed to estimate population capacity based on the photosynthetic rate of nursery lakes and lake area or volume, they have not yet been widely incorporated into spawner–recruitment analyses. Methods We tested the value of combining these lake-based capacity estimates with various hierarchical structures in spawner–­recruitment analyses to assess population status using a set of Bayesian spawner–recruitment models for 69 populations across coastal British Columbia, many of which were data limited. Results Our analysis revealed regional variation in the population productivity of Sockeye Salmon, with coastal populations exhibiting slightly lower mean productivity than those in interior watersheds. Hierarchical spawner–recruitment models with and without informative lake habitat-based priors greatly improved predictive ability across all populations. Conclusions These findings reveal opportunities to integrate spatial analyses of habitat characteristics with population models to inform the conservation and management of exploited species and their natal habitats, particularly where populations are data limited.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.143
Threshold uncertainty score0.971

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0000.005
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.263
Teacher spread0.239 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2025
Admission routes3
Has abstractyes

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