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Record W4410502299 · doi:10.3390/ani15101461

Association of NCOA6 Gene Polymorphism with Milk Production Traits in Chinese Holstein Cows

2025· article· en· W4410502299 on OpenAlexaff
Muhammad Talha Bin Tahir, Sahar Ghulam Mohyuddin, Yiyang Yao, Yanru Wang, Yan Liang, Niel A. Karrow, Yongjiang Mao

Bibliographic record

VenueAnimals · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic and phenotypic traits in livestock
Canadian institutionsUniversity of Guelph
FundersNational Science and Technology Major Project
KeywordsSingle-nucleotide polymorphismBiologyLactationGeneticsLinkage disequilibriumCandidate geneGenotypeGeneSNP genotypingGenotypingSNPGenetic association

Abstract

fetched live from OpenAlex

Nuclear receptor coactivator 6 is a gene that produces a protein that regulates transcriptional activity. It is also involved in many processes like cell survival, metabolism, homeostasis, and embryonic development. This study focused on studying the genetic influence of single-nucleotide polymorphisms (SNPs) within the NCOA6 gene on lactation performance characteristics. The objective of this study was to determine the genetic impact of SNPs of the NCOA6 gene on milk production traits. After the random selection of twenty cows, PCR amplification and sequencing were performed from their blood samples to find the SNPs present in the bovine NCOA6 gene. As a result, two SNPs, g.71544C > T and g.87310A > G, were found. Then, the genotyping of the cows (n = 985) was conducted using a Sequenom MassARRAY based on previously identified SNP information. The least-square method was applied to study the links between lactation traits, somatic cell score (SSC), and 305-day milk output. The results indicated that the SNP g.87310A > G was strongly associated with g.71544C > T in linkage disequilibrium. The single-nucleotide polymorphism g.87310A > G showed a very strong association with daily milk yield and 305-day milk production. Individuals with the AA genotype exhibited a notable increase in daily milk production by 1.64 kg, and their 305-day milk yield was approximately 500 kg higher. This variation demonstrated a significant genetic effect on milk output. In brief, the pleiotropic influence of the cattle NCOA6 gene on lactation traits was revealed in this study. However, additional research will provide a basis for further exploring the underlying correlation and theoretical framework of the molecular genetics of milk composition and the production attributes of Holstein cows.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.667
Threshold uncertainty score0.362

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.230
Teacher spread0.225 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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