Whole-genome sequencing of the ant <i>Crematogaster osakensis</i> (Hymenoptera: Formicidae: Myrmicinae)
Bibliographic record
Abstract
The ant Crematogaster osakensis (Hymenoptera: Formicidae: Myrmicinae) serves as a valuable model organism for investigating queen-specific traits, such as reproductive capacity and longevity, at the cellular and molecular levels. To support future research on queen traits using molecular techniques, including genome editing and multi-omics data analyses, we performed whole-genome sequencing of this species. The genome size of C. osakensis was estimated to be 284 Mb, with a heterozygosity of 0.26%. Annotation revealed the presence of 16,053 protein-coding genes. Furthermore, using the coding sequences annotated in this study, we reanalyzed previously obtained transcriptome data to identify highly expressed genes in the reproductive organs of queens and males. This data will contribute to a deeper understanding of the genetic mechanisms underlying reproductive strategies in ants.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.001 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.001 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".