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Record W4410518842 · doi:10.1002/jcc.70131

Development and Validation of Atomic Group Descriptors for Substituent Effects

2025· article· en· W4410518842 on OpenAlexafffund
Kevin M. Lefrancois‐Gagnon, Robert C. Mawhinney

Bibliographic record

VenueJournal of Computational Chemistry · 2025
Typearticle
Languageen
FieldPhysics and Astronomy
TopicAdvanced Chemical Physics Studies
Canadian institutionsLakehead University
FundersNatural Sciences and Engineering Research Council of CanadaAlliance de recherche numérique du CanadaNorthern Ontario Heritage Fund Corporation
KeywordsSubstituentComputational chemistryChemistryAtomic chargeMoleculeChemical physicsStereochemistryOrganic chemistry

Abstract

fetched live from OpenAlex

Substituent constants are often described with experimental proxies based on a simplified substituent effect model. While good insights have been derived from such proxies, the true properties of the substituent, through which a more thorough understanding of the substituent effect might be assessed, are not often investigated. Here, we have developed an atomic graph descriptor model for substituent properties using the Quantum Theory of Atoms in Molecules, comprising atomic, bond critical point, and charge concentration properties. These descriptors are shown to contain similar information to some traditionally used field and resonance parameters. The use of such descriptors for studying the substituent effect should provide greater insights into the true origin of the effect that substituents have on molecular systems.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.218
Threshold uncertainty score0.255

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.251
Teacher spread0.244 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2025
Admission routes2
Has abstractyes

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