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Record W4410594123 · doi:10.1101/2025.05.16.654552

Change point based dynamic functional connectivity estimation outperforms sliding window and static estimation for classification of early mild cognitive impairment in resting-state fMRI

2025· preprint· en· W4410594123 on OpenAlexaff
Martin Ondrus, Ivor Cribben

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2025
Typepreprint
Languageen
FieldNeuroscience
TopicFunctional Brain Connectivity Studies
Canadian institutionsWomen and Children’s Health Research InstituteUniversity of Alberta
Fundersnot available
KeywordsEstimationSliding window protocolResting state fMRIWindow (computing)Cognitive impairmentFunctional connectivityDynamic functional connectivityCognitionState (computer science)Computer sciencePoint (geometry)Artificial intelligencePsychologyPattern recognition (psychology)MathematicsAlgorithmNeuroscienceEngineering

Abstract

fetched live from OpenAlex

Abstract The most widely used inputs in classification models of brain disorders such as early mild cognitive impairment (eMCI) or Alzheimer’s disease are estimates of static-based functional connectivity (SFC) and sliding window dynamic functional connectivity (swDFC). Although these methods are convenient for estimation and computational purposes, as it keeps the estimation tractable, they present a simplified version of a highly integrated and dynamic phenomenon. Change point dynamic functional connectivity (cpDFC) methods, which are far less commonly used, offer an alternative to swDFC approaches. In this study, we consider a classification task between controls and patients with eMCI using resting-state functional magnetic resonance imaging (fMRI) data from the Alzheimer’s Disease Neuroimaging Initiative (ADNI) studies, ADNI2 and ADNIGO. Our results indicate that the DFC methods are generally superior to the SFC methods when used as inputs into the classification model. Most importantly, we find that the cpDFC methods are generally superior to the widely used swDFC methods. We discuss how cpDFC methods offer many distinct advantages over swDFC methods, namely, the parsimony of network features and ease of interpretability. We validate the robustness and consistency of our results by testing the methods on an additional resting-state fMRI dataset of mild cognitive impairment patients. These findings call into question the validity of numerous fMRI studies that have utilized inferior approaches, such as SFC and swDFC, as inputs to classification models to predict various brain disorders. Finally, we present an ensemble model of the best models, which achieves an accuracy of 91.17% from leave-one-out cross-validation of subjects with eMCI. Our results suggest that the underlying functional networks are dynamic, multiscale, and that different FC methods capture distinct information for classification efficacy.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.005
metaresearch head score (Gemma)0.013
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.013
Threshold uncertainty score0.025

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0050.013
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.053
GPT teacher head0.277
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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