Towards an improved representation of the relationship between root traits and nitrogen losses in process-based models
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Bibliographic record
Abstract
CONTEXT Nitrogen (N) application to crops is crucial to feed an increasing world population. Yet, much of this N is not taken up by crops, initiating a cascade of N losses with dire environmental and economic consequences. There is, therefore, a need to develop crops with traits that make them use N more efficiently, thereby reducing N losses. Process-based models have been used to design in-silico crops with desirable traits to maximize yield and increase climate resiliency, but few have been used with the perspective of reducing N losses. OBJECTIVE To examine the way process-based models capture interactions between root traits and N losses, and propose opportunities to improve model representation of observed relationships. METHODS We synthesize the current knowledge on the relationships between plant traits and N losses based on experiments reported in the literature, conduct a survey of process-based models simulating crop growth and N losses, and run a sensitivity analysis with selected models (DSSAT, APSIM, DNDCvCAN, Daisy). RESULTS AND CONCLUSIONS The results show that the relationships between root traits and N losses can be very strong in experiments, but model simulations do not capture the magnitude of these associations well. This is mainly due to the lack of a robust representation of the plant root mechanisms influencing N losses. Suggested model improvements include designing new functions to link root traits with key N-cycling processes supported by experimental evidence – such as root exudation of various compounds including biological nitrification inhibitors – and using easily observable morphological traits in process-based models as proxies to predict changes induced by plants on N-cycling by soil microbial communities. SIGNIFICANCE This work represents a key step towards designing novel root function-based ideotypes adapted to reduced fertilizer inputs while maintaining the same level of yield, and that is, therefore, potentially less harmful to the environment.
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Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.001 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.000 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it