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Record W4410967627 · doi:10.1038/s41598-026-52194-3

Insights into protein synthesis dynamics of gilts from the same genetic background and age differing in protein deposition

2025· preprint· en· W4410967627 on OpenAlexafffund
Aline Remus, Marie‐France Palin, H. Lapierre, Jaap J. van Milgen, J. Pomar

Bibliographic record

VenueScientific Reports · 2025
Typepreprint
Languageen
FieldAgricultural and Biological Sciences
TopicMeat and Animal Product Quality
Canadian institutionsAgriculture and Agri-Food Canada
FundersAgriculture and Agri-Food CanadaMcGill University
KeywordsDeposition (geology)Dynamics (music)Protein dynamicsComputational biologyChemistryBiologyGeneticsCell biologyProtein structurePhysicsBiochemistry

Abstract

fetched live from OpenAlex

Abstract Protein synthesis in Low and High protein deposition (PD) gilts, exploring regulatory pathways within the same genetic background and age were studied. Gilts in Low (157 g/d) and High (219 g/d) PD groups underwent jugular vein cannulation to assess insulin, IGF-I and glucose postprandial responses to the same nutrient intake. 13 C-valine administration enabled measuring protein synthesis rate and efficiency. Results showed 94% greater ( P < 0.05) fractional synthesis rates in the longissimus dorsi and tended ( P = 0.10) to a greater (11%) absolute synthesis rate in the liver of High PD gilts. High PD gilts tended ( P = 0.10) to be more sensitive to insulin. Transcriptomics analyses in muscle identified 67 up-regulated and 102 down-regulated unique genes. Among the up-regulated genes, four olfactory receptors (OR4L1, OR5D13, OR6B2, OR10R2) and one ribosomal protein (RPS15A) present the highest fold-changes in High vs Low PD gilts. Functional analyses identified six enriched gene ontology terms relate to muscle development, three to protein metabolism and four to signaling pathways. Rap1 signaling and regulation of actin cytoskeleton were over-represented KEGG pathways. High PD gilts exhibit greater protein synthesis and efficiency, with transcriptomic evidence suggesting improved insulin sensitivity and reduced muscle protein degradation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.035
GPT teacher head0.244
Teacher spread0.209 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes2
Has abstractyes

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