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Record W4411060915 · doi:10.1101/2025.06.04.657868

Metal-Binding Ligands Rather Than Redox Active Metabolites Are Essential to Microbially-Induced Corrosion of Cobalt

2025· preprint· en· W4411060915 on OpenAlexafffund
Annika DeJager, Anna E. Kirkland, Aaron Hinz, David McMullin, Daniel S. Grégoire

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2025
Typepreprint
Languageen
FieldMaterials Science
TopicCorrosion Behavior and Inhibition
Canadian institutionsCarleton University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsPhenazineCorrosionCobaltBacteriaChemistryMicrobiologyMaterials scienceMetallurgyBiologyBiochemistryGenetics

Abstract

fetched live from OpenAlex

Abstract Microbially-induced corrosion (MIC) has been well-studied in the context of damage to iron-bearing infrastructure, where microbes can solubilize solid elemental iron using redox-active metabolites such as phenazines. Whether such pathways can solubilize economically-critical cobalt remains poorly understood. We hypothesized that secondary metabolites produced by the model bacterium Pseudomonas chlororaphis subspecies aureofaciens associated with MIC of iron could corrode cobalt by oxidation ( i.e., phenazines) or by acting as a ligand ( i.e., cyanide). One-week incubations using live cells supplied with Co(0) wires led to 20-30% cobalt mass losses and ∼2200 µM Co(2+) recovered in solution, which was at least 3-fold higher than filtered cultures and sterile medium controls. Removing the capacity for cells to produce phenazines and cyanide showed similar corrosion compared to wild type cells and phenazine standards did not corrode cobalt, ruling these metabolites out as contributors to MIC. Further experiments testing whether metabolite mixtures devoid of phenazines could corrode Co(0) in the presence and absence of oxygen confirmed that atmospheric oxygen initiates Co(0) oxidation, and that unidentified cell-derived metabolites drive MIC forward by keeping Co(2+) from precipitating as oxides that form a passivation layer on the wire surface. This revised mechanistic explanation underscores the importance of considering how abiotic redox cycling and cellular metabolites that solubilize metals interact in the MIC of non-ferrous metals. Identifying the biosynthetic pathways involved in solubilizing cobalt will be key to reframing MIC as more than an environmental concern and optimizing sustainable cobalt recovery strategies for solid waste that rely on naturally-occurring microbial metabolites. Importance Characterizing microbially-induced corrosion mechanisms for cobalt is important for predicting the fate of critical metals in the environment and optimizing sustainable strategies for cobalt reclamation from electronic waste. This study uses the model bacterium Pseudomonas chlororaphis subspecies aureofaciens to test if redox-active phenazines and the metal-binding metabolite cyanide can corrode elemental cobalt. We repeatedly observed that live cells corroded cobalt, but that corrosion did not rely on phenazines or cyanide. Instead, our results show that oxygen oxidized elemental cobalt and unidentified metabolites keep cobalt ions in solution to limit cobalt oxide precipitation and drive the corrosion reaction forward. Our study reinforces the need to consider connections between abiotic and biotic reactions in the corrosion of metals other than iron. Understanding these mechanisms is critical to reframing microbial corrosion as a sustainable approach for metal recovery and our study makes the case that it is possible for the critical metal cobalt.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.247
Teacher spread0.232 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes2
Has abstractyes

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