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Record W4411078979 · doi:10.1016/j.pmpp.2025.102783

Development of a rapid screen to identify formulations that enhance plant resistance to viral infection

2025· article· en· W4411078979 on OpenAlexafffund
Fathy E. El-Gebaly, Wenzi Ckurshumova, Jun Liu, Michael Fefer, Evan C. Krysmanski, Robin K. Cameron

Bibliographic record

VenuePhysiological and Molecular Plant Pathology · 2025
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Virus Research Studies
Canadian institutionsSuncor Energy (Canada)Centennial CollegeMcMaster University
FundersNatural Sciences and Engineering Research Council of CanadaMitacsMcMaster University
KeywordsBiologyResistance (ecology)Viral infectionVirologyBiotechnologyComputational biologyVirusEcology

Abstract

fetched live from OpenAlex

A screening method was developed to identify formulations that enhance plant resistance to viral infection. A modified Tobacco rattle virus (TRV) genome with green fluorescent protein (TRV-GFP) was delivered into Nicotiana benthamiana cells using Agrobacterium tumefaciens . Subjective scales based on TRV-GFP fluorescence in inoculated and systemic leaves were created and validated by examining TRV coat protein expression using RT-PCR. This rapid 7-day Agrobacterium -TRV-GFP/ N. benthamiana screen was used to test many formulations containing sodium magnesium chlorophyllin (Mg-chl) with various surfactants. Treatment with Mg-chl formulation 1 and 2 resulted in significant reductions in TRV-GFP levels in N. benthamiana inoculated and systemic leaves compared to mock-treated plants, without causing phytotoxic effects. Given that Mg-chl is activated by light to produce reactive oxygen species (ROS), H 2 O 2 levels were examined and shown to increase in Mg-chl-treated leaves. Elevated H 2 O 2 levels may have initiated Salicylic acid (SA)- and Jasmonic acid (JA)-mediated resistance pathways as supported by expression of N.benthamiana Pathogenesis-Related1 ( NbPR1 ) and N.benthamiana Myelocytomatosis transcription factor ( NbMYC2) in formulation-treated leaves. Treatment with formulations 1 and 2 also provided resistance in Nicotiana tabacum leaves to Tobacco mosaic virus (TMV). Given that the JA pathway gene NbMYC2 was expressed in response to Mg-chl treatment, resistance to necrotrophic pathogens or insects may also be enhanced. Treatment with Mg-chl formulation 1 and 2 conferred resistance to TRV-GFP in N. benthamiana and TMV in N. tabacum without causing phytotoxic effects, indicating these formulations are ideal candidates for commercialization as plant immunity stimulators.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.040
GPT teacher head0.304
Teacher spread0.264 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2025
Admission routes2
Has abstractyes

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