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Record W4411093292 · doi:10.1128/jb.00090-25

<i>Fusobacterium nucleatum</i> : strategies for adapting to aerobic stress

2025· review· en· W4411093292 on OpenAlexafffund
Alexandra K. McGregor, Kirsten R. Wolthers

Bibliographic record

VenueJournal of Bacteriology · 2025
Typereview
Languageen
FieldHealth Professions
TopicTherapeutic Uses of Natural Elements
Canadian institutionsUniversity of British Columbia, Okanagan CampusUniversity of British Columbia
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsFusobacterium nucleatumBiologyFusobacteriumMicrobiologyBacteroidaceaeComputational biologyBacteriaBacteroidesGeneticsPorphyromonas gingivalis

Abstract

fetched live from OpenAlex

ABSTRACT Fusobacterium nucleatum —a gram-negative anaerobe—is commensal to the oral cavity, where it plays an important role in the maturation of the oral biofilm. The bacterium is also an opportunistic pathogen, given its association with systemic infections and cancer progression. Although residing in largely anoxic microenvironments within the oral biofilm, F. nucleatum encounters oxygen (O₂) present in the circulating saliva and reactive oxygen species formed endogenously, by an activated immune system or neighboring oral commensal streptococci. This review explores the bacterium’s adaptive mechanisms that enable survival under oxidative stress. We discuss how F. nucleatum mitigates oxidative damage and aerobic stress through common detoxifying and repair enzymes such as peroxiredoxins, methionine sulfoxide reductases, and rubrerythrin and through the activity of the recently identified multicomponent enzyme, termed butyryl-CoA oxygen oxidoreductase. Turnover by the latter enzyme enables F. nucleatum to exploit molecular oxygen for the conservation of energy. Additionally, we discuss how a two-component signal transduction system, ModRS, a global regulator of oxidative stress, functions in part to reprogram core metabolism to counterbalance the inactivation of a glycyl radical enzyme hypersensitive to O 2 . Our findings provide new insight into how F. nucleatum resists fluctuating dioxygen environments, shedding light on its persistence in extraoral sites and its potential role in disease progression.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.935
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0030.001
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.119
GPT teacher head0.484
Teacher spread0.366 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2025
Admission routes2
Has abstractyes

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