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Record W4411116057 · doi:10.1016/j.ecolind.2025.113646

Charting a course for freshwater biomonitoring: The grand challenges identified by the global scientific community

2025· article· en· W4411116057 on OpenAlexafffund
Adam G. Yates, Robert B. Brua, Joseph M. Culp, Francisca C. Aguiar, Anila P. Ajayan, Thomas W. H. Aspin, Mirco Bundschuh, Mirian Roxana Calderón, Zoltán Csabai, Helen F. Dallas, Thibault Datry, Karina Dias‐Silva, Jean Dzavi, Judy England, Tibor Erős, Daniel Gebler, Willem Goedkoop, Alexia María González-Ferreras, David P. Hamilton, Robert M. Hughes, Leandro Juen, Ben J. Kefford, Ricardo Koroiva, Edward M. Krynak, Isabelle Lavoie, Jennifer Lento, Raphael Ligeiro, Renato Tavares Martins, Frank O. Masese, Luciano Fogaça de Assis Montag, Jordan Musetta-Lambert, Kristin J. Painter, Sandra Poikāne, Andreu Rico, Renata Ruaro, Sergi Sabater, Thaísa Sala Michelan, Jonas Schoelynck, Nathan J. Smucker, Igor Stanković, Rachel Stubbington, Heidi van Deventer, Lara Van Niekerk, Paul J. Van den Brink, Gábor Várbíró, Elizabeth W. Wanderi

Bibliographic record

VenueEcological Indicators · 2025
Typearticle
Languageen
FieldEnvironmental Science
TopicFish Ecology and Management Studies
Canadian institutionsUniversity of SaskatchewanUniversity of New BrunswickWilfrid Laurier UniversityInstitut National de la Recherche ScientifiqueEnvironment and Climate Change CanadaUniversity of Waterloo
FundersNatural Sciences and Engineering Research Council of CanadaEnvironment and Climate Change CanadaU.S. Environmental Protection Agency
KeywordsBiomonitoringGrand ChallengesCourse (navigation)EcologyEnvironmental scienceEnvironmental ethicsGeographyEnvironmental resource managementBiologyComputer scienceEngineering

Abstract

fetched live from OpenAlex

The past 50 years have seen biomonitoring emerge as an essential means of generating the knowledge needed to inform protection and restoration of freshwater ecosystems. Despite the successes of biomonitoring, most freshwater ecosystems remain unmonitored. Moreover, degradation of freshwaters continues at a rapid rate with new threats and novel stressors emerging that are difficult to assess using existing techniques. New technologies and techniques have been developed to improve biomonitoring, but application has been slow and integration with existing approaches is often problematic. Clearly, freshwater biomonitoring faces many important challenges that must be addressed to meet management needs of the coming decades. We identify Grand Challenges facing freshwater biomonitoring with the aim of encouraging research and practice to address these challenges. We asked 256 biomonitoring scientists from around the globe to identify what they considered the most important challenges. From their submissions we established five Grand Challenges and 18 associated subchallenges. For each Grand Challenge, we outline the current state of biomonitoring practice and suggest promising pathways and approaches to address them. By identifying and describing these challenges, we strive to position freshwater biomonitoring to take advantage of emerging opportunities and enhance its capacity to meet current and future management needs.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.063
metaresearch head score (Gemma)0.069
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Qualitative · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.063
Threshold uncertainty score0.331

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0630.069
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0030.003
Science and technology studies0.0100.010
Scholarly communication0.0190.023
Open science0.0050.015
Research integrity0.0160.027
Insufficient payload (model declined to judge)0.0150.006

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.030
GPT teacher head0.294
Teacher spread0.265 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designQualitative
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations8
Published2025
Admission routes2
Has abstractyes

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Same venueEcological IndicatorsSame topicFish Ecology and Management StudiesFrench-language works237,207