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An in silico study reveals how architectural and mechanical cues jointly regulate angiogenesis and bone regeneration in 3D printed scaffolds

2025· article· en· W4411400126 on OpenAlexaff
Chiara Dazzi, Kian F. Eichholz, Fiona E. Freeman, Daniel J. Kelly, Sara Checa

Bibliographic record

VenueComputers in Biology and Medicine · 2025
Typearticle
Languageen
FieldEngineering
TopicBone Tissue Engineering Materials
Canadian institutionsTrinity College
FundersEuropean Regional Development FundDeutsche ForschungsgemeinschaftScience Foundation Ireland
KeywordsRegeneration (biology)In silicoAngiogenesis3d printedComputer scienceCell biologyBiologyBiomedical engineeringEngineeringCancer research

Abstract

fetched live from OpenAlex

The treatment of large bone defects is an unmet clinical need. 3D printed scaffolds offer a promising solution, however they are still not widely employed in clinical practice due to inconsistent healing outcomes and limited understanding of the underlying regeneration mechanisms. To address this, we developed a computer model for 3D printed scaffold-guided bone regeneration and angiogenesis. Our novel computer model successfully recapitulated the bone regeneration process within two 3D printed scaffold architectures: one comprised of microfibres of 20 μm diameter fabricated by melt electrowriting and another comprised of larger diameter fibres of 200 μm fabricated by fused deposition modelling. Thereafter, the model was employed to further assess the specific contribution of structural and mechanical cues on vascularisation and bone formation. We found that scaffolds fabricated by melt electrowriting enhanced bone formation because of the advantageous architectural features such as high surface-area-to-volume ratio, despite the lower mechanical stiffness. Additionally, their high open porosity facilitated vessel infiltration and induced mechanical strains accelerating vessel growth as compared to fused deposition modelling scaffolds. However, the small pore size on the outer surface might limit the invasion of larger vessels, which is expected to occur at the later stages of healing. Understanding how scaffold architecture and mechanical properties jointly orchestrate angiogenesis and bone formation is essential for optimising scaffold design and enhancing the regeneration of large bone defects. In silico models like the one presented in this study hold great promise for advancing scaffold design and enhancing clinical outcomes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.264
Teacher spread0.255 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations7
Published2025
Admission routes1
Has abstractno

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