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Intra and interspecies interaction between mass confined animals and their handlers – an ideal reservoir for Coronavirus evolution

2021· article· en· W4411583879 on OpenAlexvenueno aff
Yves Muscat Baron

Bibliographic record

VenueCanadian Journal of Infection Control · 2021
Typearticle
Languageen
FieldMedicine
TopicZoonotic diseases and public health
Canadian institutionsnot available
Fundersnot available
KeywordsCoronavirus disease 2019 (COVID-19)Ideal (ethics)CoronavirusSevere acute respiratory syndrome coronavirus 2 (SARS-CoV-2)2019-20 coronavirus outbreakBiologyVirologyMedicinePhilosophyEpistemologyOutbreakInfectious disease (medical specialty)

Abstract

fetched live from OpenAlex

Multiple variants of the virus responsible for COVID-19 have been detected since the pandemic started, however a miniscule minority succeed in persisting and successfully promulgating infection in humans. A research group in Basel, Switzerland has detected a persistent mutant designated as 20A.EU1 of COVID-19, which has spread extensively in the European Continent. The initial stages of the variant appear to have originated in the North East region of Spain and two outbreaks of infection with this variant were detected in farmers coming from the provinces of Aragon and Catalonia in late June 2020. Later in July, more than 100,000 minks in the Spanish North East were culled as they were found to be infected by SARS-CoV-2. There is the possibility that the mass confinement of infected animals resulted in high viral reproduction rates increasing the risk for the development of mutants, which through crossing-over and natural selection persisted to become pathogenic in humans.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.014

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.039
GPT teacher head0.310
Teacher spread0.271 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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