MétaCan
Menu
Back to cohort

Evaluation of the accuracy in the application of the Canadian Nosocomial Infection Surveillance Program (CNISP) bloodstream infection surveillance definitions

2023· article· en· W4411638769 on OpenAlexvenueaboutno aff
Jennifer Ellison, Joelle Cayen, Robyn Mitchell, Kathryn Bush

Bibliographic record

VenueCanadian Journal of Infection Control · 2023
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBacterial Identification and Susceptibility Testing
Canadian institutionsnot available
Fundersnot available
KeywordsBloodstream infectionMedicineEpidemiological surveillanceIntensive care medicineEpidemiologyInternal medicine

Abstract

fetched live from OpenAlex

Background: There is an ongoing need to track and prevent infections acquired within healthcare facilities. The goal of this study was to evaluate the validity and reliability of Canadian Nosocomial Infection Surveillance Program (CNISP) healthcare-associated (HA) bloodstream infection (BSI) surveillance data by assessing the application of case definitions. Methods: In September 2019, a survey with nine BSI case studies and 19 associated questions was provided to staff from 78 eligible hospitals, representing 40 hospital networks. Results: A total of 723 responses were received from 58% of CNISP sites. Correct responses were reported as a proportion of all responses, with a mean survey score of 87.6% (Median, 89.5%, Range, 52.6%-100%). Scores were similar across all question types: case definition, case classification, and source of infection (88.5%, 84.5% and 88.2% respectively). Conclusion: CNISP case definitions, case classifications and criteria for source of infection were correctly and consistently applied in most case scenarios, highlighting the high quality of BSI surveillance data collected through CNISP. Ongoing data quality reviews to check inter-rater interpretation are important to ensure the validity and reliability of national surveillance of healthcare-acquired infections.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.106
metaresearch head score (Gemma)0.253
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.780
Threshold uncertainty score0.559

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1060.253
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0040.004
Science and technology studies0.0010.002
Scholarly communication0.0020.001
Open science0.0020.002
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.036
GPT teacher head0.297
Teacher spread0.261 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes2
Has abstractyes

Explore more

Same venueCanadian Journal of Infection ControlSame topicBacterial Identification and Susceptibility TestingFrench-language works237,207