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A novel adaptive time-window method for detecting slow wave–spindle coupling: Comparison of temporal co-occurrence and phase-amplitude coupling approaches

2025· article· en· W4411918588 on OpenAlexafffund
Daniel Baena, L. Bryan Ray, Stuart Fogel

Bibliographic record

VenueJournal of Neuroscience Methods · 2025
Typearticle
Languageen
FieldNeuroscience
TopicSleep and Wakefulness Research
Canadian institutionsUniversity of OttawaRoyal Ottawa Mental Health Centre
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsCoupling (piping)AmplitudePhase (matter)Window (computing)PhysicsTime–frequency analysisBiological systemComputer scienceMaterials scienceOpticsBiologyTelecommunicationsQuantum mechanics

Abstract

fetched live from OpenAlex

BACKGROUND: Slow wave-spindle (SW-SP) coupling is critical to the role of sleep in cognition. However, the reliability and validity of available detection methods remain lacking, employ varying approaches, and have yet to be directly compared and rigorously validated. This study aimed to: (1) compare phase amplitude coupling (PAC)-based methods (PACTools and YASA) with the "temporal co-occurrence", Fixed Time Window approach for detecting SW-SP coupling, and, (2) introduce a refined adaptive SW-SP coupling method to improve precision and accuracy, by precisely aligning spindle detection with slow wave half-wave durations. NEW METHOD: A novel SW-SP coupling detection method was developed, incorporating dynamic time windows based on slow wave half-wave durations. This method adjusts to the morphology of individual slow waves offering precise alignment of spindle events with slow wave peaks and troughs. RESULTS: PAC-based methods showed high sensitivity but low specificity, resulting in excessive false positives. Across PAC indices (MVLMI, KLMI, PLV, GLMMI), the average F1-score was ∼0.45 ± 0.01. YASA, which detects coupling events based on sigma-band oscillations, exhibited moderate accuracy (0.46 ± 0.007), with an F1-score of 0.446 ± 0.011, reflecting its tendency to over-detect events due to reliance on sigma power fluctuations rather than discrete spindles. The Fixed Time Window method demonstrated higher specificity, identifying 533 ± 28 coupled spindles per participant, but relied on static temporal boundaries, leading to an average lag of 1.04 ± 0.01 s relative to slow wave peaks. The Adaptive Half-Wave method improved upon this by dynamically adjusting detection windows to slow wave morphology, reducing the average lag to 0.15 ± 0.007 s while maintaining high specificity (accuracy = 0.83 ± 0.01, precision = 0.96 ± 0.01). COMPARISON WITH EXISTING METHODS: The adaptive method provides a significant improvement in temporal precision and specificity by dynamically aligning detection windows with slow wave morphology. Fully integrated into the Counting Sheep PSG EEG toolbox, it streamlines workflows for spindle detection, slow wave characterization, and coupling analysis within an easy to use, EEGLAB-compatible environment. CONCLUSIONS: As SW-SP coupling gains recognition as an important measure of sleep's role in cognition, the need for a standardized detection method has become clear. The adaptive method provides a robust, open-source solution, addressing the need for standardized SW-SP coupling detection.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.007
metaresearch head score (Gemma)0.012
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch, Meta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.500
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0070.012
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0000.001
Open science0.0010.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.361
GPT teacher head0.498
Teacher spread0.137 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2025
Admission routes2
Has abstractyes

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