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Record W4412124047 · doi:10.1371/journal.pclm.0000659

Marine communities do not follow the paradigm of increasing similarity through time

2025· article· en· W4412124047 on OpenAlexafffund
Zoë J. Kitchel, Aurore Maureaud, Alexa Fredston, Nancy L. Shackell, Bastien Mérigot, James T. Thorson, Laurène Pécuchet, Juliano Palacios‐Abrantes, Maria Lourdes D. Palomares, A. Esteban Acón, Mark Belchier, Gioacchino Bono, Pierluigi Carbonara, Martin A. Collins, Luis A. Cubillos, Tracey P. Fairweather, Maria Cristina Follesa, Cristina García Ruíz, Maria Teresa Farriols Garau, Germana Garofalo, Igor Isajlović, Johannes N. Kathena, Mariano Koen‐Alonso, Porzia Maiorano, Chiara Manfredi, Jurgen Mifsud, Richard L. O’Driscoll, Mario Sbrana, Jón Sólmundsson, María Teresa Spedicato, F Stephenson, Karl-Michael Werner, Daniela V. Yepsen, Walter Zupa, Malin L. Pinsky

Bibliographic record

VenuePLOS Climate · 2025
Typearticle
Languageen
FieldEnvironmental Science
TopicMarine and fisheries research
Canadian institutionsUniversity of British ColumbiaBedford Institute of OceanographyFisheries and Oceans Canada
FundersNatural Sciences and Engineering Research Council of CanadaFondation pour la Recherche sur la BiodiversiteDirectorate for Biological SciencesU.S. Department of Education
KeywordsSimilarity (geometry)GeographyComputer scienceArtificial intelligence

Abstract

fetched live from OpenAlex

Humans have transformed ecosystems through habitat modification, harvesting, species introduction, and climate change. Changes in species distribution and composition are often thought to induce biotic homogenization, defined as an increase in the spatial similarity of species compositions through time. However, it is unclear whether homogenization is common in ocean ecosystems and if changes in similarity exhibit linear or more complex dynamics. Here, we assessed patterns of homogenization or its converse (differentiation) across more than 175,000 samples of 2,006 demersal fish species from 34 regions spanning six decades and 20% of the planet’s continental shelf area. While ten regions (29%) recorded significant homogenization, eleven (32%) recorded significant differentiation. Non-monotonic temporal fluctuations in species composition occurred in 15 regions, highlighting complex dynamics missed by before-and-after snapshots that can drive spurious conclusions about trends in similarity. Fishing pressure and temperature helped explain variance in similarity across years and regions. However, the strength and direction of these effects differed by region. Here we showed that, despite intense anthropogenic impacts on the oceans, the majority of demersal marine fish communities do not follow the global homogenization paradigm common in other realms.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.495
Threshold uncertainty score0.991

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.002
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0100.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.031
GPT teacher head0.266
Teacher spread0.235 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2025
Admission routes2
Has abstractyes

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