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Record W4412480663 · doi:10.1152/physrev.00022.2024

Sensing molecular carbon dioxide: a translational focus for respiratory disease

2025· review· en· W4412480663 on OpenAlex
István Vadász, Eoin P. Cummins, Deborah H. Brotherton, Satoru Matsuda, Laura A. Dada, Ori Green, Dustin T. King, Vitalii Kryvenko, Masahiko Shigemura, Peter H. S. Sporn, Moritz J. Strowitzki, Martin J. Cann, Jacob I. Sznajder

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenuePhysiological Reviews · 2025
Typereview
Languageen
FieldMedicine
TopicRespiratory Support and Mechanisms
Canadian institutionsSimon Fraser University
FundersMedical Research CouncilBundesministerium für Bildung und ForschungNational Institutes of HealthGovernment of CanadaNational Institute on AgingDeutsche ForschungsgemeinschaftUK Research and InnovationU.S. Department of Veterans AffairsLeverhulme TrustNational Heart, Lung, and Blood InstituteVon-Behring-Röntgen-Stiftung
KeywordsContext (archaeology)Respiratory systemHypercapniaBiologyHomeostasisCell biologyImmunologyAnatomy

Abstract

fetched live from OpenAlex

The last two decades of research on carbon dioxide have demonstrated that CO 2 is far more than a waste product of aerobic metabolism leading to acidosis and that it elicits biological responses directly via non-pH-dependent molecular interactions. New specialized methodologies have mapped CO 2 incorporation into specific regions of CO 2 -sensitive proteins and linked these events to altered cellular function. CO 2 affects a host of biological responses related to respiratory disease, including control of respiration, protein maturation, alveolar fluid homeostasis, wound repair, innate immunity, host defense, and airway contractility. Elevated CO 2 (hypercapnia) appears to be primarily deleterious in pulmonary diseases, leading to a heightened interest in strategies to reduce excess CO 2 in patients with hypercapnic respiratory failure. Here, we summarize recently generated knowledge on molecular CO 2 sensing and signaling and the potential translational relevance of these processes in the context of respiratory disease. We need to grow this field further by encouraging experts in basic and translational science to contribute to more fully elucidating CO 2 sensing, signaling, and downstream effects. Understanding the biology and clinical consequences of perturbations in CO 2 homeostasis should no longer be considered secondary to studying oxygen sensing and signaling in respiratory medicine.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.969
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0040.003
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.149
GPT teacher head0.407
Teacher spread0.257 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it