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Record W4412526071 · doi:10.1021/jacs.5c07566

PEG-Grafted Oligolysines Stabilize DNA Origami While Enhancing Receptor-Specific Cell Binding

2025· article· en· W4412526071 on OpenAlexafffund
Mohammadamir G. Moghadam, Travis R. Douglas, Shana Alexander, Lindsey K. Fiddes, Grayson Tilstra, Omar F. Khan, Leo Y. T. Chou

Bibliographic record

VenueJournal of the American Chemical Society · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicAdvanced biosensing and bioanalysis techniques
Canadian institutionsUniversity of Toronto
FundersNatural Sciences and Engineering Research Council of CanadaCanadian Institutes of Health ResearchCanada First Research Excellence Fund
KeywordsChemistryPEG ratioDNA origamiBiophysicsCell biologyReceptorDNACellBiochemistry

Abstract

fetched live from OpenAlex

DNA nanostructures (DNs) offer programmable platforms for targeted biomedical applications, but their limited stability under physiological conditions has hindered their utility. Protective surface modifiers, or “coatings”, can improve DN stability but often impede access of surface-displayed ligands to cell receptors, reducing receptor engagement and target cell binding. Here, we report polyethylene glycol (PEG)-grafted oligolysine coatings that simultaneously enhance DN structural stability and preserve receptor-specific cell binding. We synthesized a 36-member coating library varying in lysine valency, PEG molecular weight, and grafting density, and identified three formulations that bound DNs with ∼ 6-fold higher affinity and conferred ∼ 30-fold greater cargo stability than the widely used K 10 - b -PEG 5k block copolymer. When functionalized with antibodies, coated DNs selectively engaged Fcγ receptors on DC2.4 dendritic cells─a phagocytic cell line prone to nonspecific interactions with uncoated DNs─achieving a 12-fold increase in binding specificity relative to K 10 - b -PEG 5k . Statistical modeling revealed that optimal performance required coordinated tuning of multiple parameters, underscoring the importance of multiparametric design. This work identifies improved protective coatings for DNA origami and establishes a design framework for engineering biostable, receptor-targeted DNA nanodevices for biological applications.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.252
Teacher spread0.245 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations9
Published2025
Admission routes2
Has abstractyes

Explore more

Same venueJournal of the American Chemical Society→Same topicAdvanced biosensing and bioanalysis techniques→French-language works237,207→