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Record W4412766837 · doi:10.3389/fgene.2025.1628632

MicroRNAs as novel biomarkers for prenatal fetal congenital heart disease – systematic literature review

2025· review· en· W4412766837 on OpenAlexaboutno aff
Adrianna Kondracka, Paulina Gil-Kulik, Magda Rybak-Krzyszkowska, Jakub Staniczek, Anna Oniszczuk, Bartosz Kondracki

Bibliographic record

VenueFrontiers in Genetics · 2025
Typereview
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCongenital heart defects research
Canadian institutionsnot available
Fundersnot available
KeywordsFetusMedicinePrenatal diagnosisAmniotic fluidPregnancyBioinformaticsSystematic reviewUmbilical cordBiologyMEDLINEGeneticsImmunology

Abstract

fetched live from OpenAlex

Introduction: CHD accounts for about one-third of all congenital malformations and is the leading cause of infant mortality. Currently, the primary method for diagnosing CHD during pregnancy is fetal echocardiography. Several studies have observed significant differences in the expression levels of specific miRNAs between CHD fetuses and normal fetuses. This systematic review explores the potential of miRNAs as non-invasive biomarkers for the prenatal detection of CHD in fetuses. Material and methods: The systematic review followed PRISMA guidelines, conducting a detailed search across PubMed, Scopus, and Web of Science using predefined terms related to microRNAs and congenital heart defects. Inclusion was limited to original, full-text articles in English, while non-English studies, reviews, and inaccessible full texts were excluded. Data extraction and quality assessment using the Newcastle Ottawa Scale ensured comprehensive evaluation and minimized bias. Results: Studies explored the potential of miRNAs as biomarkers for detecting congenital heart defects (CHD) in fetuses, employing diverse sample types such as maternal serum, umbilical cord blood, and amniotic fluid. Diagnostic methods primarily included fetal echocardiography, complemented by postnatal confirmation through surgery or autopsy. Gestational ages at sample collection ranged predominantly from the second trimester (16-27 weeks) to narrower windows, reflecting methodological variability across studies. The included studies utilized advanced technologies, such as next-generation sequencing (e.g., Illumina HiSeq, NovaSeq) and microarrays, for discovery-phase experiments, while validation predominantly employed qRT-PCR techniques. Identified miRNAs showed heterogeneity in expression patterns and diagnostic potential, with several studies reporting high sensitivity, specificity, and AUC values for specific miRNAs like miR-146a-5p and miR-142-5p. While some miRNAs demonstrated exceptional diagnostic accuracy, others were only described in terms of differential expression, highlighting the variability and complexity of miRNA biomarker discovery for CHD. Conslusion: The findings of this systematic literature review provide evidence that some miRNAs could serve as non-invasive biomarkers for the early detection of CHD in fetuses. However, each of the reviewed studies identified different miRNAs as potential biomarkers. This variability may stem from differences in experimental methodologies, including approaches to miRNA isolation, quantification techniques, and the types of biological materials analyzed. Such methodological heterogeneity, combined with small sample sizes and the diverse spectrum of CHDs, underscores the need for caution in interpreting these findings. At this stage, it is not feasible to translate these results into clinical practice or establish standardized miRNA-based prenatal screening protocols.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Systematic review · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.616
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.325
Teacher spread0.310 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designSystematic review
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2025
Admission routes1
Has abstractyes

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