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Record W4412846897 · doi:10.5376/cgg.2024.15.0011

Next-Generation Sequencing Technologies: A Game Changer in Cotton Genomics

2024· article· en· W4412846897 on OpenAlexvenueno aff
Jiayi Wu, Tianze Zhang

Bibliographic record

VenueCotton Genomics and Genetics · 2024
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicResearch in Cotton Cultivation
Canadian institutionsnot available
Fundersnot available
KeywordsGenomicsDNA sequencingComputational biologyComputer scienceBiologyGenomeGeneticsGene

Abstract

fetched live from OpenAlex

Next-generation sequencing (NGS) technology has revolutionized the field of cotton genomics, providing unprecedented insights into the genetic structure, functional genomics, and breeding strategies for this economically important crop. This study systematically explores the transformative impact of NGS on cotton genomics and its key advancements. NGS has enabled the construction of high-quality reference genomes and de novo assemblies, facilitating detailed studies on genetic diversity, population genomics, and phylogenetic relationships. The integration of NGS with genome editing technologies such as CRISPR/Cas9 has paved the way for precise genetic modifications, accelerating the development of superior cotton varieties. Despite technical challenges, data management complexities, and cost barriers, the continuous evolution of NGS technology promises to overcome these limitations. The future of cotton genomics lies in the integration of NGS with other omics approaches, promoting sustainable cotton production through advanced breeding programs and comprehensive genetic analyses.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.017
metaresearch head score (Gemma)0.013
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: none
Teacher disagreement score0.017
Threshold uncertainty score0.090

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0170.013
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.002
Science and technology studies0.0010.002
Scholarly communication0.0040.008
Open science0.0020.003
Research integrity0.0030.006
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.130
GPT teacher head0.279
Teacher spread0.149 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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