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Record W4412994099 · doi:10.3899/jrheum.2025-0267

The Scientific Method and Advancing Omic Technologies: Breakthroughs in Psoriatic Disease

2025· article· en· W4412994099 on OpenAlexvenueno aff
Hanna Johnsson, Stephen R. Pennington, Nicole L. Ward

Bibliographic record

VenueThe Journal of Rheumatology · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMetabolomics and Mass Spectrometry Studies
Canadian institutionsnot available
FundersNational Institute of Arthritis and Musculoskeletal and Skin Diseases
KeywordsMedicineContext (archaeology)Psoriatic arthritisBig dataData scienceEmerging technologiesPsoriasisDiseaseEngineering ethicsPathologyComputer scienceArtificial intelligenceImmunologyEngineeringBiology

Abstract

fetched live from OpenAlex

A morning workshop addressing the topic of "What You Always Wanted to Know About Science but Were Afraid to Ask" was held at the Group for Research and Assessment of Psoriasis and Psoriatic Arthritis (GRAPPA) 2024 annual meeting. In brief, Profs. Stephen Pennington and Nicole Ward covered the effect of recent multiomics and artificial intelligence technologies on psoriatic disease research by introducing these revolutionary advances in the context of the traditional scientific method. The workshop presented the fundamentals of genomics, transcriptomics, proteomics, and metabolomics; the limitations and challenges of these technologies; and current methods to present and interpret big data.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.150
metaresearch head score (Gemma)0.077
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: none
Teacher disagreement score0.150
Threshold uncertainty score0.795

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1500.077
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0030.002
Bibliometrics0.0060.005
Science and technology studies0.0020.016
Scholarly communication0.0130.023
Open science0.0020.008
Research integrity0.0080.022
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.271
Teacher spread0.267 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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