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Record W4413009328 · doi:10.1016/j.mran.2025.100349

Quantification of the risk of Extended-Spectrum Beta-Lactamase producing Escherichia coli colonization in humans through occupational exposure in broiler production

2025· article· en· W4413009328 on OpenAlexaboutno aff
Subhasish Basak, Nunzio Sarnino, Roswitha Merle, Lucie Collineau

Bibliographic record

VenueMicrobial Risk Analysis · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicAntibiotic Resistance in Bacteria
Canadian institutionsnot available
FundersAgence Nationale de la RechercheJoint Programming Initiative on Antimicrobial Resistance
KeywordsBroilerColonizationEscherichia coliBeta-lactamaseMicrobiologyBiologyFood scienceGene

Abstract

fetched live from OpenAlex

We propose a Quantitative Microbiological Risk Assessment (QMRA) model to quantify the risk of Extended-Spectrum Beta-Lactamase (ESBL) producing Escherichia coli (E. coli) colonization among humans through occupational exposure from broiler production. The contribution of this work is two-fold: Firstly, we adapt an existing QMRA model, originally proposed by Collineau et al. (2020) for Salmonella Heidelberg in the Canadian context, to assess the exposure to ESBL E. coli across various steps of the broiler farm-to-fork production chain within the European context. Secondly, we develop a novel QMRA model based on the guidelines of Codex Alimentarius Commission (2014) to quantify the transmission of ESBL E. coli to workers involved in the broiler production chain, via direct contact with contaminated surfaces and elements at different production steps. To the best of our knowledge, this is the first QMRA model to estimate the probability of colonization by ESBL E. coli among occupational groups engaged in various steps of broiler production. The model is used to identify steps with the highest occupational exposure and to evaluate the effectiveness of different hygiene interventions—including mask use, handwashing, and glove use—in reducing workers’ exposure. The proposed QMRA framework is designed as a risk assessment tool aligned with the One Health approach, and it is adaptable and scalable to specific broiler production systems according to the needs of risk managers. Additionally, this article discusses challenges in QMRA model validation, emphasizes the limitations of the proposed model, and explores future perspectives for improvement.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.096
Threshold uncertainty score0.617

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.002
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.254
Teacher spread0.246 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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