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Record W4413108476 · doi:10.1094/pdis-04-25-0901-sc

Georgia Blueberry <i>Neopestalotiopsis</i> Isolates, Which Are Phylogenetically Indistinguishable From the Emerging Novel Strawberry <i>Neopestalotiopsis</i> sp., Are Pathogenic to Both Blueberry and Strawberry

2025· article· en· W4413108476 on OpenAlexaboutno aff
Mirza Ashikul Beg, Jonathan E. Oliver

Bibliographic record

VenuePlant Disease · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsnot available
FundersOffice of Research, University of Georgia
KeywordsBiologyFragariaRestriction fragment length polymorphismBotanyHorticultureGeneGenotypeGenetics

Abstract

fetched live from OpenAlex

A novel Neopestalotiopsis sp. causing an emerging crown, leaf, and fruit disease on strawberry has been associated with significant losses in recent years in the Eastern United States and Canada. Particularly aggressive on strawberry relative to other Neopestalotiopsis spp., isolates of this novel species are morphologically similar to the relatively less aggressive species Neopestalotiopsis rosae and have been genetically differentiated from N. rosae based on multilocus sequence analysis as well as restriction fragment length polymorphisms (RFLPs) within the fungal beta-tubulin gene. Here, from blueberry fruit collected from commercial blueberry production sites in southern Georgia (U.S.A.), we report the isolation, identification, and characterization of Neopestalotiopsis isolates, which are phylogenetically indistinguishable from the novel Neopestalotiopsis sp. from strawberry. Isolates collected from blueberry across multiple growing seasons were identified as belonging to the novel Neopestalotiopsis sp. based on RFLP and multilocus sequence analysis. Moreover, these isolates were found to be capable of causing disease on both blueberry and strawberry plants in greenhouse experiments. These findings expand our understanding of this novel Neopestalotiopsis sp. and have implications for the diagnosis and management of Neopestalotiopsis diseases on small fruit crops.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.011
Threshold uncertainty score0.022

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.218
Teacher spread0.210 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2025
Admission routes1
Has abstractyes

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