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Record W4413127560 · doi:10.1101/2025.08.08.25333309

Causal evidence linking chronic pain genetics to late-onset asthma via the nervous system

2025· preprint· en· W4413127560 on OpenAlexafffundabout
Goodarz Koli Farhood, Marc Parisien, Matt Fillingim, C.X. Chen, Yiran Chen, N. Dimitrov, Maha Zidan, Loveni Hanumunthadu, Peter Her, Sahir Bhatnagar, Luda Diatchenko, Audrey V. Grant

Bibliographic record

VenuemedRxiv · 2025
Typepreprint
Languageen
FieldMedicine
TopicAsthma and respiratory diseases
Canadian institutionsPrincess Margaret Cancer CentreUniversity of TorontoUniversity Health NetworkMcGill UniversityMontreal Clinical Research InstituteMcGill University Health Centre
FundersCanada Excellence Research Chairs, Government of CanadaNational Institutes of HealthLouise and Alan Edwards FoundationJewish Community Foundation
KeywordsAsthmaMendelian randomizationGenome-wide association studyGenetic architectureMedicineBiobankQuantitative trait locusSingle-nucleotide polymorphismBioinformaticsGeneticsBiologyInternal medicineGeneGenotypeGenetic variants

Abstract

fetched live from OpenAlex

Abstract Background Chronic pain and asthma are associated, but the direction and basis of their genetic and biological relationship remain unclear. Methods We conducted genome-wide association (GWA), cross-trait meta-analysis, polygenic risk score (PRS) prediction, bivariate causal modeling, and Mendelian randomization (MR) across nine chronic pain traits and three asthma age-of-onset strata (<18, 18–40, and >40 years for childhood-, adult-, and late-onset asthma) in 456,958 UK Biobank (UKB) and 25,275 Canadian Longitudinal Study on Aging (CLSA) participants of European descent. We analyzed shared and distinct genetic architecture using gene-, pathway-, tissue-, and cell-type-based enrichment analyses. Results Multisite chronic pain (MCP) showed the strongest and most consistent genetic overlap with asthma, with genetic correlation increasing from childhood (rg = 0.01) to late-onset asthma (rg = 0.40). Estimated causal variants for late-onset asthma (∼1.8 K) were nested within a broader MCP profile (∼9.4 K), with fewer for childhood asthma (∼0.2 K). Using PRS, MR, and longitudinal analyses, we found that MCP contributes causally to late-onset asthma. Top causal variants from MR mapped to GMPPB–RNF123 , DCC , and FOXP2 . Conditioning by MCP amplified late-onset asthma variant effect sizes and uncovered genes enriched for immune and central nervous system pathways, tissues, and cell types. In contrast, childhood asthma showed immune-specific enrichment alone. Conclusion These findings reveal neurological function linking chronic pain to late-onset asthma, distinct from childhood asthma, and highlight a central nervous system contribution to asthma emerging later in life.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.006
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.012
Threshold uncertainty score0.024

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.006
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0040.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.297
Teacher spread0.271 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes3
Has abstractyes

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