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Derivation and Validation of a Clinical Rule to Detect Bacteremia Versus Contaminants in Positive Pediatric Blood Cultures: A Retrospective Cohort Study

2025· article· en· W4413138329 on OpenAlexafffund
Jocelyn Gravel, Charlotte Grandjean-Blanchet, Alino Demean Loghin, Brandon Noyon, Olivia Ostrow, Émilie Vallières, Soha Rached-d’Astous

Bibliographic record

VenueAnnals of Emergency Medicine · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBacterial Identification and Susceptibility Testing
Canadian institutionsHospital for Sick ChildrenUniversity of TorontoUniversité de MontréalSickKids FoundationCentre Hospitalier Universitaire Sainte-Justine
FundersUniversité de Montréal
KeywordsBacteremiaMedicineConfidence intervalRetrospective cohort studyClinical prediction ruleCohortBlood cultureCohort studyInternal medicineDerivationIntensive care medicineEmergency medicineAntibiotics

Abstract

fetched live from OpenAlex

STUDY OBJECTIVES: Fifty percent of positive blood cultures in the pediatric emergency department (ED) are contaminants. We derived and validated a clinical decision rule discriminating bacteremia from contaminants among children seen in the ED with a positive blood culture. METHODS: We used 2 cohorts of children with positive blood cultures from a Canadian pediatric ED in 2018 to 2022 (derivation) and 2023 to 2024 (validation). The primary outcome was bacteremia. Potential predictors of bacteremia were derived from a literature review and experts' consensus. We used Classification and Regression Tree models to derive a highly sensitive clinical decision rule. The validity was assessed by measuring the proportion of children with true bacteremia classified at high or moderate risk by the clinical decision rule (sensitivity) and the proportion of contaminants classified at low risk (specificity). The clinical utility was measured by comparing the clinical decision rule to the treating physician's management. RESULTS: A total of 747 children, including 368 cases of bacteremia were included in the derivation (total 574; 285 bacteremia) and validation (total 173; 83 bacteremia) cohorts. The clinical decision rule classifies children into 3 categories (high, moderate, and low risk) based on 4 criteria. It demonstrated a sensitivity of 99% (95% confidence interval [CI] 94 to 100) and a specificity of 60% (95% CI 50 to 70) in the validation cohort. Using the clinical decision rule among the 43 children initially discharged in the validation cohort would decrease the number of hospitalizations from 34 to 21 without missing a true bacteremia. CONCLUSION: We created a very sensitive clinical decision rule to identify bacteremia in children with positive blood culture. Adopting this clinical decision rule could significantly impact health system resources.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.010
metaresearch head score (Gemma)0.024
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.010
Threshold uncertainty score0.052

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0100.024
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0020.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.072
GPT teacher head0.429
Teacher spread0.357 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations1
Published2025
Admission routes2
Has abstractno

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