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Record W4413182851 · doi:10.6019/s-biad2232

Label-Free Whole Slide Virtual Multi-Staining Using Dual-Excitation Photon Absorption Remote Sensing Microscopy

2025· dataset· en· W4413182851 on OpenAlexaff
James E. D. Tweel

Bibliographic record

Venuenot available
Typedataset
Languageen
FieldEngineering
TopicPhotoacoustic and Ultrasonic Imaging
Canadian institutionsUniversity of Waterloo
Fundersnot available
KeywordsMicroscopyAbsorption (acoustics)Two-photon excitation microscopyDual (grammatical number)OpticsExcitationMaterials scienceChemistryRemote sensingPhysicsFluorescenceGeologyArt

Abstract

fetched live from OpenAlex

Abstract Histochemical staining is essential for visualizing tissue architecture but is destructive and limited by tissue availability. Virtual staining with label-free microscopy offers a non-destructive alternative, enabling multiple stains from the same section. We present a dual-excitation Photon Absorption Remote Sensing (PARS) microscopy system, the first application of 355 nm UVA alongside 266 nm UVC excitation. The 355 nm source extends PARS contrast to include red blood cells, melanin, and enhanced stromal architecture through complementary radiative and non-radiative absorption. Using the RegGAN framework, we demonstrate the first PARS virtual staining across routine (H&E) and specialized (Masson’s trichrome, PAS, Jones methenamine silver) stains in human and murine tissues. Quantitative metrics show dual-excitation improves virtual stain similarity over single-wavelength inputs. A masked evaluation by expert pathologists provides an initial, coarse assessment indicating that virtual stains achieve ratings on a visual diagnostic quality scale comparable to chemical counterparts under limited evaluation conditions. These results support dual-excitation PARS as a promising non-destructive approach for multi-stain virtual histology. Corresponding whole-slide image pairs are available at the BioImage Archive ( https://doi.org/10.6019/S-BIAD2232 ).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.004
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Dataset · Consensus signal: Dataset
Teacher disagreement score0.022
Threshold uncertainty score0.075

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.004
Meta-epidemiology (narrow)0.0030.001
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0030.002
Science and technology studies0.0010.001
Scholarly communication0.0020.001
Open science0.0040.003
Research integrity0.0030.001
Insufficient payload (model declined to judge)0.0220.035

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.279
Teacher spread0.260 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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