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Devising a novel numerical tool to predict the physical occlusion site of circulating tumor cells traveling in an arbitrary microvasculature

2025· article· en· W4413257121 on OpenAlexafffund
Pouyan Keshavarz Motamed, Mohammad Kohandel, Mahla Poudineh, Nima Maftoon

Bibliographic record

VenueComputers in Biology and Medicine · 2025
Typearticle
Languageen
FieldEngineering
TopicLattice Boltzmann Simulation Studies
Canadian institutionsUniversity of Waterloo
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsOcclusionComputer scienceSimulationMedicineCardiology

Abstract

fetched live from OpenAlex

The hematogenous spread of metastasis, one of the main ways of metastasis progression, occurs when circulating tumor cells (CTCs) are transported in the bloodstream to various organs. Tracking CTCs trajectories in the microvasculature and predicting their entrapment locations can help diagnose metastasis at an early stage and offer new medical interventions. Advanced numerical methods capable of accounting for the high deformability attribute of CTCs and fluid flow in delicate microcapillaries put forward a promising technique to decipher CTCs' fate in microvasculatures. Therefore, in this study, we developed a novel numerical tool that has the potential to predict the CTCs' physical occlusion sites after being intravasated to an arbitrary microvasculature. This numerical tool communicates with a numerical database that is generated in this study and includes the information of cell fate in both confined microcapillaries and bifurcations. For generating the database, first, using previously validated cell models, we obtained an occlusion criterion by numerically investigating the relationship between the plasma flow rate, cell size, and capillary size for CTCs traveling in a microcapillary narrower than the CTC diameter. Second, we numerically studied CTCs' fate in bifurcated microcapillaries in various bifurcated geometries, fluid flow rates, and initial cell positions for both diverging and converging bifurcations. The predictive tool presented in this study is the first of its kind and it can potentially be further expanded to incorporate more sophisticated numerical CTC fate models considering other hematogenous mechanisms such as interactions between CTCs and blood cells.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.556
Threshold uncertainty score0.321

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.284
Teacher spread0.274 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes2
Has abstractyes

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