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Reflecting on 30 years of miRNA biology in malignant hematology: current challenges and future directions

2025· article· en· W4413420129 on OpenAlexaff
Liam MacPhee, A. MAUREEN ROUHI, Ly Vu, Florian Kuchenbauer

Bibliographic record

VenueBlood Advances · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMicroRNA in disease regulation
Canadian institutionsTerry Fox Research InstituteUniversity of British Columbia
Fundersnot available
KeywordsmicroRNABiologyComputational biologyContext (archaeology)HaematopoiesisMicrovesiclesSystems biologyHematologyTranslation (biology)Myeloid leukemiaBioinformaticsStem cellCancer researchMessenger RNAImmunologyGeneticsGene

Abstract

fetched live from OpenAlex

ABSTRACT: MicroRNAs (miRNAs) are essential regulators of hematopoiesis, influencing stem cell maintenance, lineage specification, and differentiation. While their dysregulation has been widely implicated in hematological malignancies such as acute myeloid leukemia, progress toward clinical translation has been hindered by methodological inconsistencies, oversimplified interpretations, and model limitations. This viewpoint discusses the context-dependent nature of miRNA-mRNA interactions, the influence of isomiRs, and the impact of RNA-binding proteins and epitranscriptomic modifications on miRNA activity. We highlight the limitations of commonly used bulk sequencing and reductionist models, and advocate for more physiologically relevant systems, including hematopoietic organoids, single-cell and spatial transcriptomics, and CRISPR-based functional assays. Furthermore, we discuss advances in miRNA-targeted therapeutics, such as lipid nanoparticle delivery and anti-miRs. By integrating emerging technologies with standardized methodologies and biological complexity, miRNA research in hematology will uncover new regulatory mechanisms and therapeutic vulnerabilities, offering a robust path toward diagnostic, prognostic, and treatment applications.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.499
Threshold uncertainty score0.277

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.332
Teacher spread0.313 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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