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Record W4413762876 · doi:10.1101/2025.08.26.669250

Topological spatial coding for rapid generalization in the hippocampal formation

2025· preprint· en· W4413762876 on OpenAlexaff
Heejun Kim, Daniel McNamee, Nayeong Jeong, Sang Wan Lee

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2025
Typepreprint
Languageen
FieldComputer Science
TopicImage Retrieval and Classification Techniques
Canadian institutionsKootenay Association for Science & Technology
FundersMinistry of Science and ICT, South KoreaKorea Advanced Institute of Science and TechnologyNational Research Foundation of KoreaInstitute for Information and Communications Technology PromotionElectronics and Telecommunications Research InstituteNational Research Foundation
KeywordsGeneralizationTopology (electrical circuits)Coding (social sciences)Hippocampal formationComputer scienceTheoretical computer scienceMathematicsNeuroscienceBiologyCombinatorics

Abstract

fetched live from OpenAlex

The brain navigates complex environments by combining entorhinal grid codes with hippocampal place codes. Although grid codes effectively represent a current environment's geometry, their capacity to generalize across topologically analogous environments with different reward and state structures remains poorly understood. We introduce topology-aware grid coding (TAG), a computational theory that leverages topological invariance to generalize to new environments with the same topological structure but with different geometry. Drawing on the Euler characteristic from algebraic topology, TAG integrates complementary neural codes built on foundational grid bases: place codes serving as 0D vertices for self-localization, boundary codes acting as 1D edges to learn policy-independent grid codes through state prediction errors, and corner codes functioning as 2D faces for identifying topologically significant states. TAG grid codes remain stable under topology-preserving deformations yet discriminate among non-isomorphic structures. TAG develops policy-independent grid codes for novel structures more rapidly and robustly than existing approaches, balancing structure and policy encoding for multi-subgoal navigation without extensive planning. Finally, we show that TAG is compatible with transformer architectures, enabling its integration into scalable neural networks. Together, the TAG theory describes the essential nature of geometric objects to explain how the entorhinal-hippocampal system maps the unique topological structure of spaces.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.952
Threshold uncertainty score0.899

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.256
Teacher spread0.229 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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