MétaCan
Menu
Back to cohort
Record W4413766245 · doi:10.1101/2025.08.22.671726

Haploinsufficiency of KPNA7 causes otosclerosis, likely due to the release of import inhibition of PTHrP and the reactivation of chondrogenesis in the globuli interossei

2025· preprint· en· W4413766245 on OpenAlexafffundabout
Tammy Benteau, Nelly Abdelfatah, Anne Griffin, Cindy Penney, Pingzhao Hu, Susan G. Stanton, Guangju Zhai, Maxime Maheu, Terry‐Lynn Young

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2025
Typepreprint
Languageen
FieldMedicine
TopicOphthalmology and Eye Disorders
Canadian institutionsUniversité de MontréalWestern UniversityMemorial University of Newfoundland
FundersCanadian Institutes of Health ResearchGenome AtlanticGenome Canada
KeywordsHaploinsufficiencyOtosclerosisChondrogenesisCell biologyInternal medicineChemistryNeuroscienceEndocrinologyMedicineBiologyAudiologyBiochemistryPhenotypeGene

Abstract

fetched live from OpenAlex

Abstract Otosclerosis is a genetic bone disorder restricted to the otic capsule and a common cause of conductive hearing loss with both familial and sporadic cases. To date, 14 genomic loci ( OTSC ) and four underlying OTSC genes ( MEPE , SERPINF1, FOXL1, SMARCA4) have been identified in autosomal dominant families. A combined genetic/genomics approach on five affected siblings of Northern European ancestry from the island of Newfoundland, Canada identified a premature stop mutation in Karyopherin subunit α7 ( KPNA7 , c.49C>T, p.R17X). KPNA7 maps to OTSC2 (7q22.1) and encodes the newest of the seven-member importin-α family of nuclear transporters and plays a critical role in early embryonic cleavage events and zygotic genome activation. Previous studies reveal that recessive KPNA7 variants cause skeletal abnormalities, including scoliosis and ocular hypertelorism in two sisters with Partial Corpus Callosum Agenesis-Cerebellar Vermis Hypoplasia With Posterior Fosa Cysts Syndrome and more recently, have been implicated in preimplantation embryo arrest (PREMBA) (OMIM 614107). Interestingly, KPNA7 is also a maternal factor with an exclusively embryonic role and likely inhibits non-classical NLS transport of PTHrP, a known activator of chondrogenesis. We propose that KPNA7 haploinsufficiency causes a failure in nuclear transport inhibition of PTHrP in the quiescent embryonic cells of the globuli interossei in the otic capsule and re-activates chondrogenesis. The KPNA7 discovery provides new insights into the pathogenesis of otosclerosis and potential for targeted therapies. Author Summary Otosclerosis is a distinctly human genetic bone disorder of the otic capsule and a major cause of progressive hearing loss in young adults, particularly in females. Even though otosclerosis has been recognized as a distinct entity for a long time, both its pathogenesis and restriction to the otic capsule remains a mystery. Here, we use a combined genetic/genomics approach to identify a premature stop mutation in five affected siblings of Northern European ancestry from the island of Newfoundland, Canada. KPNA7 encodes the newest of the seven-member importin-α family of nuclear transporters and plays a critical role in early embryonic cleavage events and zygotic genome activation. Based on the unique features of the otic capsule, we hypothesize that the premature stop mutation in KPNA7 leads to haploinsufficiency causing a failure in nuclear transport inhibition of PTHrP and reactivates chondrogenesis in the otherwise quiescent embryonic cells within the otic capsule. The KPNA7 discovery provides new insights into the pathogenesis of otosclerosis and potential for targeted therapies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.435
Threshold uncertainty score0.638

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.246
Teacher spread0.232 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes3
Has abstractyes

Explore more

Same venuebioRxiv (Cold Spring Harbor Laboratory)Same topicOphthalmology and Eye DisordersFrench-language works237,207